Protein–RNA interactions for Protein: Q61735

Cd47, Leukocyte surface antigen CD47, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd47Q61735 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Cd47Q61735 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cd47Q61735 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cd47Q61735 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cd47Q61735 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cd47Q61735 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cd47Q61735 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.9□□□□□ -0.34
Cd47Q61735 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cd47Q61735 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
Cd47Q61735 Gm6226-201ENSMUST00000117765 1146 ntBASIC12.9□□□□□ -0.34
Cd47Q61735 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC12.9□□□□□ -0.34
Cd47Q61735 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cd47Q61735 Gm27920-201ENSMUST00000183953 96 ntBASIC12.9□□□□□ -0.34
Cd47Q61735 Mir8117-201ENSMUST00000184773 107 ntBASIC12.9□□□□□ -0.34
Cd47Q61735 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC12.9□□□□□ -0.34
Cd47Q61735 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC12.9□□□□□ -0.34
Cd47Q61735 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.9□□□□□ -0.34
Cd47Q61735 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.9□□□□□ -0.34
Cd47Q61735 AC090659.1-201ENSMUST00000224334 768 ntBASIC12.9□□□□□ -0.34
Cd47Q61735 CT030684.1-201ENSMUST00000227292 914 ntBASIC12.9□□□□□ -0.34
Cd47Q61735 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cd47Q61735 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cd47Q61735 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cd47Q61735 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cd47Q61735 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Cd47Q61735 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cd47Q61735 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cd47Q61735 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cd47Q61735 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cd47Q61735 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Cd47Q61735 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cd47Q61735 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cd47Q61735 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cd47Q61735 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cd47Q61735 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Cd47Q61735 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Cd47Q61735 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Cd47Q61735 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Cd47Q61735 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd47Q61735 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.89□□□□□ -0.35
Cd47Q61735 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Cd47Q61735 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd47Q61735 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd47Q61735 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd47Q61735 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd47Q61735 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Cd47Q61735 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Cd47Q61735 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd47Q61735 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Cd47Q61735 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd47Q61735 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Cd47Q61735 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Cd47Q61735 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd47Q61735 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd47Q61735 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cd47Q61735 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd47Q61735 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd47Q61735 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd47Q61735 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Cd47Q61735 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC12.89□□□□□ -0.35
Cd47Q61735 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC12.89□□□□□ -0.35
Cd47Q61735 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC12.89□□□□□ -0.35
Cd47Q61735 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC12.89□□□□□ -0.35
Cd47Q61735 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.89□□□□□ -0.35
Cd47Q61735 Mir3113-201ENSMUST00000175478 76 ntBASIC12.89□□□□□ -0.35
Cd47Q61735 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC12.89□□□□□ -0.35
Cd47Q61735 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cd47Q61735 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd47Q61735 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd47Q61735 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Cd47Q61735 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd47Q61735 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd47Q61735 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cd47Q61735 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd47Q61735 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd47Q61735 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd47Q61735 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cd47Q61735 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd47Q61735 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Cd47Q61735 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd47Q61735 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cd47Q61735 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cd47Q61735 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cd47Q61735 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Cd47Q61735 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cd47Q61735 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
Cd47Q61735 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.88□□□□□ -0.35
Cd47Q61735 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cd47Q61735 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cd47Q61735 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cd47Q61735 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cd47Q61735 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cd47Q61735 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cd47Q61735 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cd47Q61735 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cd47Q61735 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cd47Q61735 Gm18206-201ENSMUST00000207027 926 ntBASIC12.88□□□□□ -0.35
Cd47Q61735 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cd47Q61735 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cd47Q61735 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms