Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sox17Q61473 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sox17Q61473 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Sox17Q61473 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sox17Q61473 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox17Q61473 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox17Q61473 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Sox17Q61473 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox17Q61473 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.27□□□□□ -0.29
Sox17Q61473 Gm11764-201ENSMUST00000120221 623 ntBASIC13.27□□□□□ -0.29
Sox17Q61473 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox17Q61473 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.27□□□□□ -0.29
Sox17Q61473 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Sox17Q61473 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC13.27□□□□□ -0.29
Sox17Q61473 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox17Q61473 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC13.27□□□□□ -0.29
Sox17Q61473 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox17Q61473 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox17Q61473 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox17Q61473 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox17Q61473 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sox17Q61473 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox17Q61473 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sox17Q61473 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sox17Q61473 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.27□□□□□ -0.29
Sox17Q61473 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox17Q61473 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.27□□□□□ -0.29
Sox17Q61473 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox17Q61473 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Sox17Q61473 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Sox17Q61473 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox17Q61473 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.26□□□□□ -0.29
Sox17Q61473 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox17Q61473 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox17Q61473 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox17Q61473 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox17Q61473 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox17Q61473 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Sox17Q61473 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Sox17Q61473 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox17Q61473 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sox17Q61473 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC13.26□□□□□ -0.29
Sox17Q61473 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox17Q61473 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC13.26□□□□□ -0.29
Sox17Q61473 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox17Q61473 Gm18856-201ENSMUST00000178096 1374 ntBASIC13.26□□□□□ -0.29
Sox17Q61473 Gm6550-201ENSMUST00000187574 993 ntBASIC13.26□□□□□ -0.29
Sox17Q61473 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox17Q61473 Gm18669-201ENSMUST00000216049 778 ntBASIC13.26□□□□□ -0.29
Sox17Q61473 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox17Q61473 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox17Q61473 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox17Q61473 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox17Q61473 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox17Q61473 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox17Q61473 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox17Q61473 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox17Q61473 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.26□□□□□ -0.29
Sox17Q61473 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox17Q61473 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Sox17Q61473 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.25□□□□□ -0.29
Sox17Q61473 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox17Q61473 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.25□□□□□ -0.29
Sox17Q61473 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox17Q61473 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox17Q61473 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox17Q61473 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox17Q61473 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox17Q61473 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox17Q61473 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox17Q61473 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sox17Q61473 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox17Q61473 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC13.25□□□□□ -0.29
Sox17Q61473 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.25□□□□□ -0.29
Sox17Q61473 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC13.25□□□□□ -0.29
Sox17Q61473 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC13.25□□□□□ -0.29
Sox17Q61473 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox17Q61473 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Sox17Q61473 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox17Q61473 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Sox17Q61473 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox17Q61473 AC122901.1-201ENSMUST00000214203 1790 ntBASIC13.25□□□□□ -0.29
Sox17Q61473 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox17Q61473 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.25□□□□□ -0.29
Sox17Q61473 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sox17Q61473 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Sox17Q61473 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox17Q61473 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sox17Q61473 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox17Q61473 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Sox17Q61473 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox17Q61473 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox17Q61473 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sox17Q61473 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox17Q61473 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox17Q61473 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox17Q61473 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.24□□□□□ -0.29
Sox17Q61473 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox17Q61473 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sox17Q61473 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms