Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.71□□□□□ -0.05
Smarcd1Q61466 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcd1Q61466 Wdyhv1-206ENSMUST00000227142 786 ntBASIC14.71□□□□□ -0.05
Smarcd1Q61466 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcd1Q61466 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcd1Q61466 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcd1Q61466 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcd1Q61466 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcd1Q61466 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcd1Q61466 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcd1Q61466 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.71□□□□□ -0.05
Smarcd1Q61466 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.71□□□□□ -0.05
Smarcd1Q61466 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcd1Q61466 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcd1Q61466 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcd1Q61466 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcd1Q61466 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcd1Q61466 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Smarcd1Q61466 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.71□□□□□ -0.06
Smarcd1Q61466 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.71□□□□□ -0.06
Smarcd1Q61466 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.71□□□□□ -0.06
Smarcd1Q61466 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Smarcd1Q61466 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Smarcd1Q61466 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Smarcd1Q61466 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarcd1Q61466 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC14.7□□□□□ -0.06
Smarcd1Q61466 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Smarcd1Q61466 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarcd1Q61466 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Smarcd1Q61466 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarcd1Q61466 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarcd1Q61466 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Smarcd1Q61466 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Smarcd1Q61466 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC14.7□□□□□ -0.06
Smarcd1Q61466 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC14.7□□□□□ -0.06
Smarcd1Q61466 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.7□□□□□ -0.06
Smarcd1Q61466 Gm6218-201ENSMUST00000219812 628 ntBASIC14.7□□□□□ -0.06
Smarcd1Q61466 Gm9797-201ENSMUST00000052902 613 ntBASIC14.7□□□□□ -0.06
Smarcd1Q61466 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Smarcd1Q61466 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Smarcd1Q61466 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Smarcd1Q61466 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarcd1Q61466 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarcd1Q61466 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.7□□□□□ -0.06
Smarcd1Q61466 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarcd1Q61466 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarcd1Q61466 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarcd1Q61466 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Smarcd1Q61466 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.7□□□□□ -0.06
Smarcd1Q61466 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Smarcd1Q61466 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.69□□□□□ -0.06
Smarcd1Q61466 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd1Q61466 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd1Q61466 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd1Q61466 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd1Q61466 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd1Q61466 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd1Q61466 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd1Q61466 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd1Q61466 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd1Q61466 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.69□□□□□ -0.06
Smarcd1Q61466 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.69□□□□□ -0.06
Smarcd1Q61466 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
Smarcd1Q61466 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd1Q61466 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Smarcd1Q61466 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Smarcd1Q61466 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd1Q61466 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Smarcd1Q61466 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd1Q61466 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Smarcd1Q61466 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd1Q61466 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Smarcd1Q61466 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd1Q61466 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd1Q61466 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd1Q61466 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd1Q61466 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd1Q61466 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd1Q61466 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd1Q61466 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.69□□□□□ -0.06
Smarcd1Q61466 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Smarcd1Q61466 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.68□□□□□ -0.06
Smarcd1Q61466 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcd1Q61466 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcd1Q61466 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcd1Q61466 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Smarcd1Q61466 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcd1Q61466 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcd1Q61466 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Smarcd1Q61466 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcd1Q61466 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcd1Q61466 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcd1Q61466 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcd1Q61466 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.68□□□□□ -0.06
Smarcd1Q61466 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcd1Q61466 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.68□□□□□ -0.06
Smarcd1Q61466 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcd1Q61466 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
Smarcd1Q61466 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.68□□□□□ -0.06
Smarcd1Q61466 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms