Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC18.3■□□□□ 0.52
Ccne1Q61457 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccne1Q61457 Gm9768-201ENSMUST00000206007 2861 ntBASIC18.29■□□□□ 0.52
Ccne1Q61457 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccne1Q61457 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccne1Q61457 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ccne1Q61457 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccne1Q61457 Gm13226-201ENSMUST00000117838 404 ntBASIC18.29■□□□□ 0.52
Ccne1Q61457 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccne1Q61457 Gm12485-201ENSMUST00000119641 291 ntBASIC18.29■□□□□ 0.52
Ccne1Q61457 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC18.29■□□□□ 0.52
Ccne1Q61457 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccne1Q61457 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ccne1Q61457 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ccne1Q61457 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccne1Q61457 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccne1Q61457 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccne1Q61457 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Ccne1Q61457 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccne1Q61457 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccne1Q61457 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccne1Q61457 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Ccne1Q61457 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccne1Q61457 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccne1Q61457 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccne1Q61457 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccne1Q61457 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ccne1Q61457 Gm11814-201ENSMUST00000119515 929 ntBASIC18.28■□□□□ 0.52
Ccne1Q61457 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC18.28■□□□□ 0.52
Ccne1Q61457 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccne1Q61457 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccne1Q61457 Gm4971-201ENSMUST00000205991 1108 ntBASIC18.28■□□□□ 0.52
Ccne1Q61457 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ccne1Q61457 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccne1Q61457 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Ccne1Q61457 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccne1Q61457 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccne1Q61457 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ccne1Q61457 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Ccne1Q61457 AC161252.3-201ENSMUST00000225465 1549 ntBASIC18.28■□□□□ 0.52
Ccne1Q61457 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccne1Q61457 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccne1Q61457 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC18.28■□□□□ 0.52
Ccne1Q61457 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC18.28■□□□□ 0.52
Ccne1Q61457 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
Ccne1Q61457 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccne1Q61457 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ccne1Q61457 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccne1Q61457 Gm9347-201ENSMUST00000211473 1607 ntBASIC18.27■□□□□ 0.52
Ccne1Q61457 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC18.27■□□□□ 0.52
Ccne1Q61457 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccne1Q61457 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccne1Q61457 Gm37411-201ENSMUST00000194180 2282 ntBASIC18.27■□□□□ 0.52
Ccne1Q61457 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC18.27■□□□□ 0.52
Ccne1Q61457 Mup-ps23-201ENSMUST00000118063 630 ntBASIC18.27■□□□□ 0.52
Ccne1Q61457 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC18.27■□□□□ 0.52
Ccne1Q61457 Gm16342-201ENSMUST00000124025 1025 ntBASIC18.27■□□□□ 0.52
Ccne1Q61457 Gm27772-201ENSMUST00000184900 187 ntBASIC18.27■□□□□ 0.52
Ccne1Q61457 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC18.27■□□□□ 0.52
Ccne1Q61457 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccne1Q61457 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ccne1Q61457 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccne1Q61457 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Ccne1Q61457 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.51
Ccne1Q61457 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ccne1Q61457 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC18.27■□□□□ 0.51
Ccne1Q61457 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ccne1Q61457 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ccne1Q61457 Zscan30-202ENSMUST00000224144 1458 ntBASIC18.26■□□□□ 0.51
Ccne1Q61457 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccne1Q61457 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccne1Q61457 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccne1Q61457 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccne1Q61457 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Ccne1Q61457 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccne1Q61457 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ccne1Q61457 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Ccne1Q61457 Gm12742-201ENSMUST00000117326 410 ntBASIC18.26■□□□□ 0.51
Ccne1Q61457 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC18.26■□□□□ 0.51
Ccne1Q61457 Gm6983-201ENSMUST00000214912 628 ntBASIC18.26■□□□□ 0.51
Ccne1Q61457 CT030704.2-201ENSMUST00000228887 494 ntBASIC18.26■□□□□ 0.51
Ccne1Q61457 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ccne1Q61457 Gm6091-201ENSMUST00000098307 165 ntBASIC18.26■□□□□ 0.51
Ccne1Q61457 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ccne1Q61457 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ccne1Q61457 Gm37728-201ENSMUST00000195025 2292 ntBASIC18.26■□□□□ 0.51
Ccne1Q61457 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ccne1Q61457 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccne1Q61457 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Ccne1Q61457 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Ccne1Q61457 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC18.26■□□□□ 0.51
Ccne1Q61457 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccne1Q61457 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccne1Q61457 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ccne1Q61457 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccne1Q61457 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC18.25■□□□□ 0.51
Ccne1Q61457 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
Ccne1Q61457 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ccne1Q61457 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccne1Q61457 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms