Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Col12a1Q60847 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC13.66□□□□□ -0.22
Col12a1Q60847 AC123857.2-201ENSMUST00000225756 1582 ntBASIC13.66□□□□□ -0.22
Col12a1Q60847 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col12a1Q60847 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Col12a1Q60847 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col12a1Q60847 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col12a1Q60847 Gm10146-201ENSMUST00000072739 309 ntBASIC13.66□□□□□ -0.22
Col12a1Q60847 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col12a1Q60847 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.66□□□□□ -0.22
Col12a1Q60847 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Col12a1Q60847 Gm16011-201ENSMUST00000121567 2662 ntBASIC13.66□□□□□ -0.22
Col12a1Q60847 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Col12a1Q60847 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col12a1Q60847 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.66□□□□□ -0.22
Col12a1Q60847 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col12a1Q60847 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.66□□□□□ -0.22
Col12a1Q60847 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col12a1Q60847 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.66□□□□□ -0.22
Col12a1Q60847 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC13.66□□□□□ -0.22
Col12a1Q60847 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC13.66□□□□□ -0.22
Col12a1Q60847 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col12a1Q60847 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col12a1Q60847 Gm29608-201ENSMUST00000190444 463 ntBASIC13.66□□□□□ -0.22
Col12a1Q60847 Gm44551-201ENSMUST00000208804 171 ntBASIC13.66□□□□□ -0.22
Col12a1Q60847 AC140293.1-201ENSMUST00000225626 1247 ntBASIC13.66□□□□□ -0.22
Col12a1Q60847 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col12a1Q60847 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Col12a1Q60847 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Col12a1Q60847 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Col12a1Q60847 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Col12a1Q60847 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.65□□□□□ -0.22
Col12a1Q60847 Gm12012-201ENSMUST00000118857 1066 ntBASIC13.65□□□□□ -0.22
Col12a1Q60847 Gm12208-201ENSMUST00000122004 163 ntBASIC13.65□□□□□ -0.22
Col12a1Q60847 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col12a1Q60847 Gm45770-201ENSMUST00000212105 616 ntBASIC13.65□□□□□ -0.22
Col12a1Q60847 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col12a1Q60847 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col12a1Q60847 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Col12a1Q60847 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col12a1Q60847 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col12a1Q60847 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col12a1Q60847 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col12a1Q60847 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Col12a1Q60847 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col12a1Q60847 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Col12a1Q60847 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col12a1Q60847 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col12a1Q60847 Gm14208-201ENSMUST00000119645 678 ntBASIC13.65□□□□□ -0.22
Col12a1Q60847 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Col12a1Q60847 Gm3890-201ENSMUST00000182416 207 ntBASIC13.65□□□□□ -0.22
Col12a1Q60847 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.65□□□□□ -0.22
Col12a1Q60847 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col12a1Q60847 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col12a1Q60847 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col12a1Q60847 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Col12a1Q60847 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Col12a1Q60847 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
Col12a1Q60847 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col12a1Q60847 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col12a1Q60847 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Col12a1Q60847 Gm42550-201ENSMUST00000201553 960 ntBASIC13.64□□□□□ -0.23
Col12a1Q60847 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC13.64□□□□□ -0.23
Col12a1Q60847 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col12a1Q60847 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col12a1Q60847 Gm43081-201ENSMUST00000199082 1380 ntBASIC13.64□□□□□ -0.23
Col12a1Q60847 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
Col12a1Q60847 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col12a1Q60847 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Col12a1Q60847 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col12a1Q60847 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col12a1Q60847 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col12a1Q60847 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col12a1Q60847 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col12a1Q60847 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col12a1Q60847 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col12a1Q60847 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.64□□□□□ -0.23
Col12a1Q60847 Gm9550-201ENSMUST00000161130 862 ntBASIC13.64□□□□□ -0.23
Col12a1Q60847 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC13.64□□□□□ -0.23
Col12a1Q60847 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col12a1Q60847 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.64□□□□□ -0.23
Col12a1Q60847 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC13.64□□□□□ -0.23
Col12a1Q60847 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col12a1Q60847 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.64□□□□□ -0.23
Col12a1Q60847 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Col12a1Q60847 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col12a1Q60847 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.64□□□□□ -0.23
Col12a1Q60847 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col12a1Q60847 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.64□□□□□ -0.23
Col12a1Q60847 Gm13316-201ENSMUST00000140537 691 ntBASIC13.64□□□□□ -0.23
Col12a1Q60847 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC13.64□□□□□ -0.23
Col12a1Q60847 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col12a1Q60847 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Col12a1Q60847 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col12a1Q60847 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col12a1Q60847 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col12a1Q60847 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col12a1Q60847 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col12a1Q60847 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col12a1Q60847 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms