Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nr1h4Q60641 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nr1h4Q60641 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nr1h4Q60641 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nr1h4Q60641 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nr1h4Q60641 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Nr1h4Q60641 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nr1h4Q60641 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nr1h4Q60641 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nr1h4Q60641 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nr1h4Q60641 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.48□□□□□ -0.25
Nr1h4Q60641 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.48□□□□□ -0.25
Nr1h4Q60641 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nr1h4Q60641 Gm5479-201ENSMUST00000160578 435 ntBASIC13.48□□□□□ -0.25
Nr1h4Q60641 Gm10275-202ENSMUST00000168697 495 ntBASIC13.48□□□□□ -0.25
Nr1h4Q60641 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC13.48□□□□□ -0.25
Nr1h4Q60641 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.48□□□□□ -0.25
Nr1h4Q60641 Thap2-203ENSMUST00000218989 527 ntBASIC13.48□□□□□ -0.25
Nr1h4Q60641 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC13.48□□□□□ -0.25
Nr1h4Q60641 Gm10275-201ENSMUST00000092620 635 ntBASIC13.48□□□□□ -0.25
Nr1h4Q60641 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nr1h4Q60641 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nr1h4Q60641 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nr1h4Q60641 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Nr1h4Q60641 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.48□□□□□ -0.25
Nr1h4Q60641 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nr1h4Q60641 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nr1h4Q60641 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.48□□□□□ -0.25
Nr1h4Q60641 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nr1h4Q60641 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.48□□□□□ -0.25
Nr1h4Q60641 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC13.48□□□□□ -0.25
Nr1h4Q60641 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nr1h4Q60641 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nr1h4Q60641 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nr1h4Q60641 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.47□□□□□ -0.25
Nr1h4Q60641 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Nr1h4Q60641 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nr1h4Q60641 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nr1h4Q60641 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nr1h4Q60641 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nr1h4Q60641 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nr1h4Q60641 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nr1h4Q60641 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.47□□□□□ -0.25
Nr1h4Q60641 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nr1h4Q60641 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nr1h4Q60641 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nr1h4Q60641 Gm13597-201ENSMUST00000121239 375 ntBASIC13.47□□□□□ -0.25
Nr1h4Q60641 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Nr1h4Q60641 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Nr1h4Q60641 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Nr1h4Q60641 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nr1h4Q60641 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nr1h4Q60641 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Nr1h4Q60641 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nr1h4Q60641 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nr1h4Q60641 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nr1h4Q60641 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nr1h4Q60641 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.47□□□□□ -0.25
Nr1h4Q60641 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.47□□□□□ -0.25
Nr1h4Q60641 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nr1h4Q60641 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nr1h4Q60641 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Nr1h4Q60641 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nr1h4Q60641 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nr1h4Q60641 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nr1h4Q60641 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Nr1h4Q60641 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.46□□□□□ -0.25
Nr1h4Q60641 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nr1h4Q60641 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Nr1h4Q60641 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Nr1h4Q60641 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Nr1h4Q60641 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nr1h4Q60641 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nr1h4Q60641 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nr1h4Q60641 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nr1h4Q60641 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nr1h4Q60641 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Nr1h4Q60641 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC13.46□□□□□ -0.25
Nr1h4Q60641 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nr1h4Q60641 Mir5126-201ENSMUST00000175513 77 ntBASIC13.46□□□□□ -0.25
Nr1h4Q60641 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC13.46□□□□□ -0.25
Nr1h4Q60641 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nr1h4Q60641 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Nr1h4Q60641 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Nr1h4Q60641 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nr1h4Q60641 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.46□□□□□ -0.25
Nr1h4Q60641 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nr1h4Q60641 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nr1h4Q60641 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nr1h4Q60641 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Nr1h4Q60641 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Nr1h4Q60641 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Nr1h4Q60641 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Nr1h4Q60641 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Nr1h4Q60641 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Nr1h4Q60641 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Nr1h4Q60641 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Nr1h4Q60641 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Nr1h4Q60641 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.26
Nr1h4Q60641 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms