Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
R3hdm4Q4VBF2 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
R3hdm4Q4VBF2 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
R3hdm4Q4VBF2 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
R3hdm4Q4VBF2 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC15.23■□□□□ 0.03
R3hdm4Q4VBF2 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
R3hdm4Q4VBF2 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
R3hdm4Q4VBF2 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
R3hdm4Q4VBF2 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
R3hdm4Q4VBF2 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
R3hdm4Q4VBF2 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
R3hdm4Q4VBF2 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
R3hdm4Q4VBF2 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
R3hdm4Q4VBF2 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
R3hdm4Q4VBF2 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
R3hdm4Q4VBF2 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC15.22■□□□□ 0.03
R3hdm4Q4VBF2 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
R3hdm4Q4VBF2 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
R3hdm4Q4VBF2 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC15.22■□□□□ 0.03
R3hdm4Q4VBF2 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
R3hdm4Q4VBF2 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
R3hdm4Q4VBF2 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
R3hdm4Q4VBF2 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC15.22■□□□□ 0.03
R3hdm4Q4VBF2 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC15.22■□□□□ 0.03
R3hdm4Q4VBF2 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC15.22■□□□□ 0.03
R3hdm4Q4VBF2 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC15.22■□□□□ 0.03
R3hdm4Q4VBF2 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
R3hdm4Q4VBF2 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
R3hdm4Q4VBF2 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
R3hdm4Q4VBF2 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
R3hdm4Q4VBF2 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC15.22■□□□□ 0.03
R3hdm4Q4VBF2 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.22■□□□□ 0.03
R3hdm4Q4VBF2 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
R3hdm4Q4VBF2 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
R3hdm4Q4VBF2 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
R3hdm4Q4VBF2 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.22■□□□□ 0.03
R3hdm4Q4VBF2 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
R3hdm4Q4VBF2 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
R3hdm4Q4VBF2 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
R3hdm4Q4VBF2 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
R3hdm4Q4VBF2 Gm6263-201ENSMUST00000120029 1342 ntBASIC15.21■□□□□ 0.03
R3hdm4Q4VBF2 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
R3hdm4Q4VBF2 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
R3hdm4Q4VBF2 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
R3hdm4Q4VBF2 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
R3hdm4Q4VBF2 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
R3hdm4Q4VBF2 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
R3hdm4Q4VBF2 Gm12020-201ENSMUST00000119030 2042 ntBASIC15.21■□□□□ 0.03
R3hdm4Q4VBF2 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
R3hdm4Q4VBF2 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
R3hdm4Q4VBF2 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
R3hdm4Q4VBF2 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
R3hdm4Q4VBF2 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
R3hdm4Q4VBF2 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
R3hdm4Q4VBF2 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
R3hdm4Q4VBF2 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
R3hdm4Q4VBF2 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC15.21■□□□□ 0.03
R3hdm4Q4VBF2 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC15.21■□□□□ 0.03
R3hdm4Q4VBF2 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
R3hdm4Q4VBF2 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
R3hdm4Q4VBF2 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC15.21■□□□□ 0.03
R3hdm4Q4VBF2 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
R3hdm4Q4VBF2 Mir8102-201ENSMUST00000184148 139 ntBASIC15.21■□□□□ 0.03
R3hdm4Q4VBF2 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
R3hdm4Q4VBF2 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC15.21■□□□□ 0.03
R3hdm4Q4VBF2 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
R3hdm4Q4VBF2 AC153872.1-201ENSMUST00000199539 128 ntBASIC15.21■□□□□ 0.03
R3hdm4Q4VBF2 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC15.21■□□□□ 0.03
R3hdm4Q4VBF2 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
R3hdm4Q4VBF2 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC15.21■□□□□ 0.03
R3hdm4Q4VBF2 Gm7390-201ENSMUST00000212452 1216 ntBASIC15.21■□□□□ 0.03
R3hdm4Q4VBF2 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
R3hdm4Q4VBF2 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
R3hdm4Q4VBF2 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
R3hdm4Q4VBF2 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
R3hdm4Q4VBF2 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
R3hdm4Q4VBF2 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
R3hdm4Q4VBF2 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
R3hdm4Q4VBF2 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
R3hdm4Q4VBF2 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
R3hdm4Q4VBF2 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
R3hdm4Q4VBF2 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
R3hdm4Q4VBF2 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
R3hdm4Q4VBF2 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
R3hdm4Q4VBF2 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
R3hdm4Q4VBF2 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
R3hdm4Q4VBF2 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
R3hdm4Q4VBF2 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
R3hdm4Q4VBF2 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
R3hdm4Q4VBF2 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
R3hdm4Q4VBF2 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
R3hdm4Q4VBF2 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
R3hdm4Q4VBF2 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
R3hdm4Q4VBF2 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
R3hdm4Q4VBF2 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC15.2■□□□□ 0.02
R3hdm4Q4VBF2 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC15.2■□□□□ 0.02
R3hdm4Q4VBF2 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC15.2■□□□□ 0.02
R3hdm4Q4VBF2 Mir7684-201ENSMUST00000183858 60 ntBASIC15.2■□□□□ 0.02
R3hdm4Q4VBF2 Gm21470-201ENSMUST00000187680 696 ntBASIC15.2■□□□□ 0.02
R3hdm4Q4VBF2 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms