Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Syne3Q4FZC9 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC15.03■□□□□ -0
Syne3Q4FZC9 Gm42466-201ENSMUST00000202099 1301 ntBASIC15.03■□□□□ -0
Syne3Q4FZC9 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Syne3Q4FZC9 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC15.03■□□□□ -0
Syne3Q4FZC9 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Syne3Q4FZC9 Gm14042-201ENSMUST00000120139 833 ntBASIC15.03■□□□□ -0
Syne3Q4FZC9 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC15.03■□□□□ -0
Syne3Q4FZC9 Gm7774-201ENSMUST00000200064 533 ntBASIC15.03■□□□□ -0
Syne3Q4FZC9 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC15.03■□□□□ -0
Syne3Q4FZC9 AC158529.1-201ENSMUST00000223618 239 ntBASIC15.03■□□□□ -0
Syne3Q4FZC9 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Syne3Q4FZC9 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Syne3Q4FZC9 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC15.03■□□□□ -0
Syne3Q4FZC9 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Syne3Q4FZC9 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Syne3Q4FZC9 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC15.03■□□□□ -0
Syne3Q4FZC9 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC15.03■□□□□ -0
Syne3Q4FZC9 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Syne3Q4FZC9 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Syne3Q4FZC9 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Syne3Q4FZC9 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Syne3Q4FZC9 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Syne3Q4FZC9 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Syne3Q4FZC9 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Syne3Q4FZC9 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Syne3Q4FZC9 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC15.02■□□□□ -0
Syne3Q4FZC9 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Syne3Q4FZC9 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Syne3Q4FZC9 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC15.02■□□□□ -0
Syne3Q4FZC9 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Syne3Q4FZC9 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC15.02■□□□□ -0
Syne3Q4FZC9 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Syne3Q4FZC9 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Syne3Q4FZC9 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
Syne3Q4FZC9 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC15.02■□□□□ -0
Syne3Q4FZC9 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC15.02■□□□□ -0
Syne3Q4FZC9 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Syne3Q4FZC9 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC15.02■□□□□ -0
Syne3Q4FZC9 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC15.02■□□□□ -0
Syne3Q4FZC9 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Syne3Q4FZC9 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Syne3Q4FZC9 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC15.02■□□□□ -0
Syne3Q4FZC9 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Syne3Q4FZC9 Gm43056-201ENSMUST00000197865 2791 ntBASIC15.02□□□□□ -0.01
Syne3Q4FZC9 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Syne3Q4FZC9 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Syne3Q4FZC9 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Syne3Q4FZC9 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Syne3Q4FZC9 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Syne3Q4FZC9 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Syne3Q4FZC9 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Syne3Q4FZC9 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Syne3Q4FZC9 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Syne3Q4FZC9 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Syne3Q4FZC9 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC15.01□□□□□ -0.01
Syne3Q4FZC9 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Syne3Q4FZC9 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Syne3Q4FZC9 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Syne3Q4FZC9 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Syne3Q4FZC9 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Syne3Q4FZC9 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Syne3Q4FZC9 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Syne3Q4FZC9 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Syne3Q4FZC9 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Syne3Q4FZC9 Mir449b-201ENSMUST00000104833 80 ntBASIC15.01□□□□□ -0.01
Syne3Q4FZC9 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Syne3Q4FZC9 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Syne3Q4FZC9 Gm8116-201ENSMUST00000182917 1201 ntBASIC15.01□□□□□ -0.01
Syne3Q4FZC9 Gm37230-201ENSMUST00000194491 818 ntBASIC15.01□□□□□ -0.01
Syne3Q4FZC9 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Syne3Q4FZC9 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Syne3Q4FZC9 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Syne3Q4FZC9 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Syne3Q4FZC9 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Syne3Q4FZC9 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Syne3Q4FZC9 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Syne3Q4FZC9 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Syne3Q4FZC9 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Syne3Q4FZC9 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Syne3Q4FZC9 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Syne3Q4FZC9 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Syne3Q4FZC9 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
Syne3Q4FZC9 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Syne3Q4FZC9 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Syne3Q4FZC9 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Syne3Q4FZC9 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Syne3Q4FZC9 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Syne3Q4FZC9 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Syne3Q4FZC9 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Syne3Q4FZC9 CT025610.1-201ENSMUST00000224552 1786 ntBASIC15.01□□□□□ -0.01
Syne3Q4FZC9 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Syne3Q4FZC9 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC15□□□□□ -0.01
Syne3Q4FZC9 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC15□□□□□ -0.01
Syne3Q4FZC9 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Syne3Q4FZC9 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Syne3Q4FZC9 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Syne3Q4FZC9 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Syne3Q4FZC9 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Syne3Q4FZC9 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms