Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Prpf38aQ4FK66 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Prpf38aQ4FK66 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Prpf38aQ4FK66 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Prpf38aQ4FK66 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC16.47■□□□□ 0.23
Prpf38aQ4FK66 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Prpf38aQ4FK66 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Prpf38aQ4FK66 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Prpf38aQ4FK66 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Prpf38aQ4FK66 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Prpf38aQ4FK66 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Prpf38aQ4FK66 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Prpf38aQ4FK66 Gm15240-201ENSMUST00000118156 720 ntBASIC16.47■□□□□ 0.23
Prpf38aQ4FK66 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Prpf38aQ4FK66 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Prpf38aQ4FK66 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Prpf38aQ4FK66 Ighv5-13-201ENSMUST00000193550 290 ntBASIC16.47■□□□□ 0.23
Prpf38aQ4FK66 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Prpf38aQ4FK66 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Prpf38aQ4FK66 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Prpf38aQ4FK66 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Prpf38aQ4FK66 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Prpf38aQ4FK66 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Prpf38aQ4FK66 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Prpf38aQ4FK66 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Prpf38aQ4FK66 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Prpf38aQ4FK66 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC16.47■□□□□ 0.23
Prpf38aQ4FK66 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Prpf38aQ4FK66 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Prpf38aQ4FK66 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC16.47■□□□□ 0.23
Prpf38aQ4FK66 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Prpf38aQ4FK66 Gm37411-201ENSMUST00000194180 2282 ntBASIC16.47■□□□□ 0.23
Prpf38aQ4FK66 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Prpf38aQ4FK66 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prpf38aQ4FK66 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prpf38aQ4FK66 Gm15163-201ENSMUST00000120749 1302 ntBASIC16.46■□□□□ 0.23
Prpf38aQ4FK66 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prpf38aQ4FK66 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Prpf38aQ4FK66 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prpf38aQ4FK66 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Prpf38aQ4FK66 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prpf38aQ4FK66 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prpf38aQ4FK66 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC16.46■□□□□ 0.23
Prpf38aQ4FK66 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prpf38aQ4FK66 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Prpf38aQ4FK66 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prpf38aQ4FK66 Gm12138-201ENSMUST00000122180 951 ntBASIC16.46■□□□□ 0.23
Prpf38aQ4FK66 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC16.46■□□□□ 0.23
Prpf38aQ4FK66 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prpf38aQ4FK66 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC16.46■□□□□ 0.23
Prpf38aQ4FK66 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prpf38aQ4FK66 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC16.46■□□□□ 0.23
Prpf38aQ4FK66 AC238811.3-201ENSMUST00000225422 709 ntBASIC16.46■□□□□ 0.23
Prpf38aQ4FK66 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Prpf38aQ4FK66 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prpf38aQ4FK66 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prpf38aQ4FK66 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prpf38aQ4FK66 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Prpf38aQ4FK66 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Prpf38aQ4FK66 AC148324.1-201ENSMUST00000219034 4240 ntBASIC16.46■□□□□ 0.22
Prpf38aQ4FK66 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Prpf38aQ4FK66 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Prpf38aQ4FK66 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Prpf38aQ4FK66 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prpf38aQ4FK66 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Prpf38aQ4FK66 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prpf38aQ4FK66 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prpf38aQ4FK66 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prpf38aQ4FK66 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC16.45■□□□□ 0.22
Prpf38aQ4FK66 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Prpf38aQ4FK66 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Prpf38aQ4FK66 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Prpf38aQ4FK66 Gm18905-201ENSMUST00000205454 928 ntBASIC16.45■□□□□ 0.22
Prpf38aQ4FK66 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC16.45■□□□□ 0.22
Prpf38aQ4FK66 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prpf38aQ4FK66 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC16.45■□□□□ 0.22
Prpf38aQ4FK66 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prpf38aQ4FK66 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Prpf38aQ4FK66 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prpf38aQ4FK66 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Prpf38aQ4FK66 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Prpf38aQ4FK66 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Prpf38aQ4FK66 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Prpf38aQ4FK66 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prpf38aQ4FK66 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Prpf38aQ4FK66 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prpf38aQ4FK66 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Prpf38aQ4FK66 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf38aQ4FK66 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Prpf38aQ4FK66 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf38aQ4FK66 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf38aQ4FK66 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Prpf38aQ4FK66 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Prpf38aQ4FK66 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf38aQ4FK66 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf38aQ4FK66 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Prpf38aQ4FK66 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC16.44■□□□□ 0.22
Prpf38aQ4FK66 Gm12341-201ENSMUST00000119724 503 ntBASIC16.44■□□□□ 0.22
Prpf38aQ4FK66 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf38aQ4FK66 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms