Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nlrc4Q3UP24 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.89□□□□□ -0.03
Nlrc4Q3UP24 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nlrc4Q3UP24 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.89□□□□□ -0.03
Nlrc4Q3UP24 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Nlrc4Q3UP24 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Nlrc4Q3UP24 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.89□□□□□ -0.03
Nlrc4Q3UP24 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.89□□□□□ -0.03
Nlrc4Q3UP24 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nlrc4Q3UP24 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nlrc4Q3UP24 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nlrc4Q3UP24 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.89□□□□□ -0.03
Nlrc4Q3UP24 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nlrc4Q3UP24 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.89□□□□□ -0.03
Nlrc4Q3UP24 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.89□□□□□ -0.03
Nlrc4Q3UP24 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nlrc4Q3UP24 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nlrc4Q3UP24 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nlrc4Q3UP24 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Nlrc4Q3UP24 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nlrc4Q3UP24 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nlrc4Q3UP24 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Nlrc4Q3UP24 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Nlrc4Q3UP24 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nlrc4Q3UP24 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nlrc4Q3UP24 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Nlrc4Q3UP24 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nlrc4Q3UP24 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
Nlrc4Q3UP24 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nlrc4Q3UP24 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nlrc4Q3UP24 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nlrc4Q3UP24 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
Nlrc4Q3UP24 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nlrc4Q3UP24 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nlrc4Q3UP24 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nlrc4Q3UP24 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nlrc4Q3UP24 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.88□□□□□ -0.03
Nlrc4Q3UP24 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Nlrc4Q3UP24 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Nlrc4Q3UP24 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nlrc4Q3UP24 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC14.88□□□□□ -0.03
Nlrc4Q3UP24 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Nlrc4Q3UP24 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nlrc4Q3UP24 Gm8584-201ENSMUST00000171982 758 ntBASIC14.88□□□□□ -0.03
Nlrc4Q3UP24 Mir7684-201ENSMUST00000183858 60 ntBASIC14.88□□□□□ -0.03
Nlrc4Q3UP24 Mir8102-201ENSMUST00000184148 139 ntBASIC14.88□□□□□ -0.03
Nlrc4Q3UP24 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.88□□□□□ -0.03
Nlrc4Q3UP24 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.88□□□□□ -0.03
Nlrc4Q3UP24 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.88□□□□□ -0.03
Nlrc4Q3UP24 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nlrc4Q3UP24 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.88□□□□□ -0.03
Nlrc4Q3UP24 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nlrc4Q3UP24 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nlrc4Q3UP24 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Nlrc4Q3UP24 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Nlrc4Q3UP24 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nlrc4Q3UP24 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Nlrc4Q3UP24 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nlrc4Q3UP24 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nlrc4Q3UP24 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nlrc4Q3UP24 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Nlrc4Q3UP24 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nlrc4Q3UP24 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Nlrc4Q3UP24 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nlrc4Q3UP24 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nlrc4Q3UP24 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.88□□□□□ -0.03
Nlrc4Q3UP24 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Nlrc4Q3UP24 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nlrc4Q3UP24 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nlrc4Q3UP24 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nlrc4Q3UP24 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nlrc4Q3UP24 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nlrc4Q3UP24 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nlrc4Q3UP24 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nlrc4Q3UP24 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nlrc4Q3UP24 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nlrc4Q3UP24 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Nlrc4Q3UP24 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nlrc4Q3UP24 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nlrc4Q3UP24 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nlrc4Q3UP24 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC14.87□□□□□ -0.03
Nlrc4Q3UP24 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nlrc4Q3UP24 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.87□□□□□ -0.03
Nlrc4Q3UP24 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nlrc4Q3UP24 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.87□□□□□ -0.03
Nlrc4Q3UP24 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nlrc4Q3UP24 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Nlrc4Q3UP24 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.87□□□□□ -0.03
Nlrc4Q3UP24 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.87□□□□□ -0.03
Nlrc4Q3UP24 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC14.87□□□□□ -0.03
Nlrc4Q3UP24 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.87□□□□□ -0.03
Nlrc4Q3UP24 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.87□□□□□ -0.03
Nlrc4Q3UP24 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC14.87□□□□□ -0.03
Nlrc4Q3UP24 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nlrc4Q3UP24 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nlrc4Q3UP24 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nlrc4Q3UP24 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nlrc4Q3UP24 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
Nlrc4Q3UP24 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nlrc4Q3UP24 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms