Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Cks1brtQ3UNC9 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC10.15□□□□□ -0.79
Cks1brtQ3UNC9 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Cks1brtQ3UNC9 Gm4780-202ENSMUST00000215200 2644 ntBASIC10.15□□□□□ -0.79
Cks1brtQ3UNC9 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Cks1brtQ3UNC9 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Cks1brtQ3UNC9 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Cks1brtQ3UNC9 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Cks1brtQ3UNC9 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cks1brtQ3UNC9 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cks1brtQ3UNC9 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cks1brtQ3UNC9 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC10.14□□□□□ -0.79
Cks1brtQ3UNC9 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cks1brtQ3UNC9 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cks1brtQ3UNC9 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cks1brtQ3UNC9 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Cks1brtQ3UNC9 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cks1brtQ3UNC9 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Cks1brtQ3UNC9 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC10.14□□□□□ -0.79
Cks1brtQ3UNC9 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC10.14□□□□□ -0.79
Cks1brtQ3UNC9 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Cks1brtQ3UNC9 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC10.14□□□□□ -0.79
Cks1brtQ3UNC9 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Cks1brtQ3UNC9 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cks1brtQ3UNC9 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cks1brtQ3UNC9 Gm8318-201ENSMUST00000182954 872 ntBASIC10.14□□□□□ -0.79
Cks1brtQ3UNC9 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC10.14□□□□□ -0.79
Cks1brtQ3UNC9 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Cks1brtQ3UNC9 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC10.14□□□□□ -0.79
Cks1brtQ3UNC9 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC10.14□□□□□ -0.79
Cks1brtQ3UNC9 AC158538.2-201ENSMUST00000225455 906 ntBASIC10.14□□□□□ -0.79
Cks1brtQ3UNC9 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cks1brtQ3UNC9 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cks1brtQ3UNC9 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Cks1brtQ3UNC9 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cks1brtQ3UNC9 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Cks1brtQ3UNC9 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cks1brtQ3UNC9 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cks1brtQ3UNC9 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC10.14□□□□□ -0.79
Cks1brtQ3UNC9 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Cks1brtQ3UNC9 Gm29361-201ENSMUST00000183323 2000 ntBASIC10.14□□□□□ -0.79
Cks1brtQ3UNC9 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cks1brtQ3UNC9 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cks1brtQ3UNC9 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cks1brtQ3UNC9 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC10.14□□□□□ -0.79
Cks1brtQ3UNC9 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Cks1brtQ3UNC9 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cks1brtQ3UNC9 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cks1brtQ3UNC9 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1brtQ3UNC9 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC10.13□□□□□ -0.79
Cks1brtQ3UNC9 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1brtQ3UNC9 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1brtQ3UNC9 Gm43868-201ENSMUST00000205187 2114 ntBASIC10.13□□□□□ -0.79
Cks1brtQ3UNC9 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1brtQ3UNC9 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1brtQ3UNC9 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1brtQ3UNC9 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1brtQ3UNC9 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1brtQ3UNC9 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1brtQ3UNC9 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1brtQ3UNC9 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1brtQ3UNC9 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1brtQ3UNC9 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Cks1brtQ3UNC9 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1brtQ3UNC9 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1brtQ3UNC9 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1brtQ3UNC9 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1brtQ3UNC9 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC10.13□□□□□ -0.79
Cks1brtQ3UNC9 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1brtQ3UNC9 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC10.13□□□□□ -0.79
Cks1brtQ3UNC9 Gm37179-201ENSMUST00000194862 823 ntBASIC10.13□□□□□ -0.79
Cks1brtQ3UNC9 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1brtQ3UNC9 Gm18101-201ENSMUST00000215769 548 ntBASIC10.13□□□□□ -0.79
Cks1brtQ3UNC9 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1brtQ3UNC9 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1brtQ3UNC9 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1brtQ3UNC9 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1brtQ3UNC9 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1brtQ3UNC9 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1brtQ3UNC9 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1brtQ3UNC9 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC10.13□□□□□ -0.79
Cks1brtQ3UNC9 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1brtQ3UNC9 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1brtQ3UNC9 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1brtQ3UNC9 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1brtQ3UNC9 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1brtQ3UNC9 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Cks1brtQ3UNC9 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1brtQ3UNC9 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1brtQ3UNC9 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1brtQ3UNC9 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1brtQ3UNC9 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC10.13□□□□□ -0.79
Cks1brtQ3UNC9 AC154262.2-201ENSMUST00000224310 2293 ntBASIC10.13□□□□□ -0.79
Cks1brtQ3UNC9 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC10.13□□□□□ -0.79
Cks1brtQ3UNC9 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC10.13□□□□□ -0.79
Cks1brtQ3UNC9 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC10.13□□□□□ -0.79
Cks1brtQ3UNC9 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Cks1brtQ3UNC9 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1brtQ3UNC9 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1brtQ3UNC9 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms