Protein–RNA interactions for Protein: Q3UN04

Usp30, Ubiquitin carboxyl-terminal hydrolase 30, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp30Q3UN04 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp30Q3UN04 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp30Q3UN04 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp30Q3UN04 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp30Q3UN04 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp30Q3UN04 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp30Q3UN04 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Usp30Q3UN04 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Usp30Q3UN04 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp30Q3UN04 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp30Q3UN04 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.18□□□□□ -0.14
Usp30Q3UN04 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.18□□□□□ -0.14
Usp30Q3UN04 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Usp30Q3UN04 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Usp30Q3UN04 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp30Q3UN04 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Usp30Q3UN04 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Usp30Q3UN04 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Usp30Q3UN04 Gm9002-201ENSMUST00000178437 499 ntBASIC14.18□□□□□ -0.14
Usp30Q3UN04 Mir7654-201ENSMUST00000185082 70 ntBASIC14.18□□□□□ -0.14
Usp30Q3UN04 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.18□□□□□ -0.14
Usp30Q3UN04 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp30Q3UN04 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp30Q3UN04 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.18□□□□□ -0.14
Usp30Q3UN04 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp30Q3UN04 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp30Q3UN04 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp30Q3UN04 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp30Q3UN04 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Usp30Q3UN04 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Usp30Q3UN04 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp30Q3UN04 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Usp30Q3UN04 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp30Q3UN04 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp30Q3UN04 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp30Q3UN04 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp30Q3UN04 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Usp30Q3UN04 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.18□□□□□ -0.14
Usp30Q3UN04 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Usp30Q3UN04 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp30Q3UN04 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Usp30Q3UN04 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp30Q3UN04 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Usp30Q3UN04 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp30Q3UN04 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Usp30Q3UN04 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp30Q3UN04 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Usp30Q3UN04 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Usp30Q3UN04 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp30Q3UN04 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.17□□□□□ -0.14
Usp30Q3UN04 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC14.17□□□□□ -0.14
Usp30Q3UN04 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Usp30Q3UN04 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Usp30Q3UN04 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC14.17□□□□□ -0.14
Usp30Q3UN04 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.17□□□□□ -0.14
Usp30Q3UN04 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Usp30Q3UN04 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC14.17□□□□□ -0.14
Usp30Q3UN04 Gm18905-201ENSMUST00000205454 928 ntBASIC14.17□□□□□ -0.14
Usp30Q3UN04 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.17□□□□□ -0.14
Usp30Q3UN04 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Usp30Q3UN04 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.17□□□□□ -0.14
Usp30Q3UN04 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp30Q3UN04 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Usp30Q3UN04 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp30Q3UN04 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp30Q3UN04 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Usp30Q3UN04 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Usp30Q3UN04 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp30Q3UN04 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Usp30Q3UN04 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp30Q3UN04 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp30Q3UN04 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp30Q3UN04 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Usp30Q3UN04 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp30Q3UN04 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.17□□□□□ -0.14
Usp30Q3UN04 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Usp30Q3UN04 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Usp30Q3UN04 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.17□□□□□ -0.14
Usp30Q3UN04 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Usp30Q3UN04 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.17□□□□□ -0.14
Usp30Q3UN04 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Usp30Q3UN04 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp30Q3UN04 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Usp30Q3UN04 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Usp30Q3UN04 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp30Q3UN04 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp30Q3UN04 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Usp30Q3UN04 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp30Q3UN04 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Usp30Q3UN04 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp30Q3UN04 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.16□□□□□ -0.14
Usp30Q3UN04 Gm28911-201ENSMUST00000188837 117 ntBASIC14.16□□□□□ -0.14
Usp30Q3UN04 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.16□□□□□ -0.14
Usp30Q3UN04 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp30Q3UN04 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Usp30Q3UN04 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp30Q3UN04 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp30Q3UN04 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp30Q3UN04 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Usp30Q3UN04 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms