Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC16.65■□□□□ 0.26
Limch1Q3UH68 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Limch1Q3UH68 Gm6888-201ENSMUST00000221983 706 ntBASIC16.65■□□□□ 0.26
Limch1Q3UH68 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Limch1Q3UH68 AC140375.2-201ENSMUST00000225283 584 ntBASIC16.65■□□□□ 0.26
Limch1Q3UH68 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Limch1Q3UH68 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Limch1Q3UH68 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Limch1Q3UH68 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Limch1Q3UH68 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Limch1Q3UH68 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Limch1Q3UH68 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Limch1Q3UH68 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Limch1Q3UH68 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Limch1Q3UH68 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Limch1Q3UH68 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Limch1Q3UH68 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Limch1Q3UH68 Gm38102-201ENSMUST00000192791 1935 ntBASIC16.64■□□□□ 0.26
Limch1Q3UH68 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Limch1Q3UH68 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Limch1Q3UH68 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Limch1Q3UH68 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Limch1Q3UH68 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC16.64■□□□□ 0.25
Limch1Q3UH68 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Limch1Q3UH68 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Limch1Q3UH68 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Limch1Q3UH68 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC16.64■□□□□ 0.25
Limch1Q3UH68 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Limch1Q3UH68 Gm25144-201ENSMUST00000179561 110 ntBASIC16.64■□□□□ 0.25
Limch1Q3UH68 Gm25352-201ENSMUST00000179815 110 ntBASIC16.64■□□□□ 0.25
Limch1Q3UH68 Mir7684-201ENSMUST00000183858 60 ntBASIC16.64■□□□□ 0.25
Limch1Q3UH68 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Limch1Q3UH68 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Limch1Q3UH68 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Limch1Q3UH68 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Limch1Q3UH68 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Limch1Q3UH68 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC16.64■□□□□ 0.25
Limch1Q3UH68 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Limch1Q3UH68 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Limch1Q3UH68 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Limch1Q3UH68 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Limch1Q3UH68 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Limch1Q3UH68 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Limch1Q3UH68 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Limch1Q3UH68 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Limch1Q3UH68 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Limch1Q3UH68 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Limch1Q3UH68 Mmp14-206ENSMUST00000225641 3238 ntBASIC16.63■□□□□ 0.25
Limch1Q3UH68 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Limch1Q3UH68 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Limch1Q3UH68 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Limch1Q3UH68 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Limch1Q3UH68 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Limch1Q3UH68 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Limch1Q3UH68 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC16.63■□□□□ 0.25
Limch1Q3UH68 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC16.63■□□□□ 0.25
Limch1Q3UH68 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
Limch1Q3UH68 Gm5763-201ENSMUST00000155951 1530 ntBASIC16.63■□□□□ 0.25
Limch1Q3UH68 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Limch1Q3UH68 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Limch1Q3UH68 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC16.63■□□□□ 0.25
Limch1Q3UH68 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Limch1Q3UH68 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Limch1Q3UH68 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Limch1Q3UH68 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Limch1Q3UH68 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Limch1Q3UH68 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Limch1Q3UH68 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Limch1Q3UH68 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Limch1Q3UH68 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Limch1Q3UH68 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Limch1Q3UH68 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Limch1Q3UH68 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Limch1Q3UH68 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Limch1Q3UH68 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Limch1Q3UH68 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Limch1Q3UH68 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Limch1Q3UH68 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC16.62■□□□□ 0.25
Limch1Q3UH68 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC16.62■□□□□ 0.25
Limch1Q3UH68 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC16.62■□□□□ 0.25
Limch1Q3UH68 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC16.62■□□□□ 0.25
Limch1Q3UH68 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC16.62■□□□□ 0.25
Limch1Q3UH68 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Limch1Q3UH68 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Limch1Q3UH68 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Limch1Q3UH68 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Limch1Q3UH68 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Limch1Q3UH68 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Limch1Q3UH68 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Limch1Q3UH68 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Limch1Q3UH68 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Limch1Q3UH68 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Limch1Q3UH68 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Limch1Q3UH68 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Limch1Q3UH68 Gm26513-201ENSMUST00000181802 2489 ntBASIC16.61■□□□□ 0.25
Limch1Q3UH68 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
Limch1Q3UH68 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Limch1Q3UH68 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Limch1Q3UH68 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Limch1Q3UH68 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms