Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Brf2Q3UAW9 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Brf2Q3UAW9 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Brf2Q3UAW9 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Brf2Q3UAW9 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Brf2Q3UAW9 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Brf2Q3UAW9 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Brf2Q3UAW9 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Brf2Q3UAW9 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Brf2Q3UAW9 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
Brf2Q3UAW9 Gm25287-201ENSMUST00000103846 110 ntBASIC13.33□□□□□ -0.28
Brf2Q3UAW9 Gm22918-201ENSMUST00000103855 110 ntBASIC13.33□□□□□ -0.28
Brf2Q3UAW9 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.33□□□□□ -0.28
Brf2Q3UAW9 Gm6222-201ENSMUST00000120787 396 ntBASIC13.33□□□□□ -0.28
Brf2Q3UAW9 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC13.33□□□□□ -0.28
Brf2Q3UAW9 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Brf2Q3UAW9 Gm24513-201ENSMUST00000174964 138 ntBASIC13.33□□□□□ -0.28
Brf2Q3UAW9 Mir6990-201ENSMUST00000183724 91 ntBASIC13.33□□□□□ -0.28
Brf2Q3UAW9 Gm27397-201ENSMUST00000184997 107 ntBASIC13.33□□□□□ -0.28
Brf2Q3UAW9 Gm43125-201ENSMUST00000201724 730 ntBASIC13.33□□□□□ -0.28
Brf2Q3UAW9 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Brf2Q3UAW9 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.33□□□□□ -0.28
Brf2Q3UAW9 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.33□□□□□ -0.28
Brf2Q3UAW9 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.33□□□□□ -0.28
Brf2Q3UAW9 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.33□□□□□ -0.28
Brf2Q3UAW9 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Brf2Q3UAW9 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Brf2Q3UAW9 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Brf2Q3UAW9 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Brf2Q3UAW9 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Brf2Q3UAW9 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.33□□□□□ -0.28
Brf2Q3UAW9 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Brf2Q3UAW9 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Brf2Q3UAW9 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Brf2Q3UAW9 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Brf2Q3UAW9 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.33□□□□□ -0.28
Brf2Q3UAW9 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Brf2Q3UAW9 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Brf2Q3UAW9 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Brf2Q3UAW9 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Brf2Q3UAW9 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.32□□□□□ -0.28
Brf2Q3UAW9 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Brf2Q3UAW9 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Brf2Q3UAW9 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Brf2Q3UAW9 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Brf2Q3UAW9 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Brf2Q3UAW9 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Brf2Q3UAW9 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Brf2Q3UAW9 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Brf2Q3UAW9 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Brf2Q3UAW9 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Brf2Q3UAW9 Gm14822-201ENSMUST00000122247 291 ntBASIC13.32□□□□□ -0.28
Brf2Q3UAW9 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.32□□□□□ -0.28
Brf2Q3UAW9 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Brf2Q3UAW9 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Brf2Q3UAW9 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC13.32□□□□□ -0.28
Brf2Q3UAW9 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Brf2Q3UAW9 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Brf2Q3UAW9 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Brf2Q3UAW9 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Brf2Q3UAW9 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Brf2Q3UAW9 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.32□□□□□ -0.28
Brf2Q3UAW9 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Brf2Q3UAW9 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Brf2Q3UAW9 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.32□□□□□ -0.28
Brf2Q3UAW9 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Brf2Q3UAW9 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Brf2Q3UAW9 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Brf2Q3UAW9 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Brf2Q3UAW9 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Brf2Q3UAW9 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Brf2Q3UAW9 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Brf2Q3UAW9 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Brf2Q3UAW9 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Brf2Q3UAW9 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Brf2Q3UAW9 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Brf2Q3UAW9 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.31□□□□□ -0.28
Brf2Q3UAW9 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.31□□□□□ -0.28
Brf2Q3UAW9 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Brf2Q3UAW9 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Brf2Q3UAW9 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.31□□□□□ -0.28
Brf2Q3UAW9 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Brf2Q3UAW9 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Brf2Q3UAW9 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Brf2Q3UAW9 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Brf2Q3UAW9 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Brf2Q3UAW9 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.31□□□□□ -0.28
Brf2Q3UAW9 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Brf2Q3UAW9 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Brf2Q3UAW9 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Brf2Q3UAW9 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Brf2Q3UAW9 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Brf2Q3UAW9 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Brf2Q3UAW9 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Brf2Q3UAW9 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Brf2Q3UAW9 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Brf2Q3UAW9 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Brf2Q3UAW9 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Brf2Q3UAW9 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Brf2Q3UAW9 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms