Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim43aQ3TL54 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim43aQ3TL54 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Trim43aQ3TL54 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim43aQ3TL54 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim43aQ3TL54 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim43aQ3TL54 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim43aQ3TL54 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim43aQ3TL54 Gm12020-201ENSMUST00000119030 2042 ntBASIC15□□□□□ -0.01
Trim43aQ3TL54 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trim43aQ3TL54 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim43aQ3TL54 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Trim43aQ3TL54 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim43aQ3TL54 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim43aQ3TL54 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Trim43aQ3TL54 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim43aQ3TL54 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim43aQ3TL54 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trim43aQ3TL54 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trim43aQ3TL54 Gm12260-201ENSMUST00000122447 411 ntBASIC15□□□□□ -0.01
Trim43aQ3TL54 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trim43aQ3TL54 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC15□□□□□ -0.01
Trim43aQ3TL54 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC15□□□□□ -0.01
Trim43aQ3TL54 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim43aQ3TL54 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim43aQ3TL54 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Trim43aQ3TL54 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trim43aQ3TL54 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trim43aQ3TL54 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim43aQ3TL54 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Trim43aQ3TL54 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trim43aQ3TL54 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim43aQ3TL54 CT025610.1-201ENSMUST00000224552 1786 ntBASIC15□□□□□ -0.01
Trim43aQ3TL54 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC15□□□□□ -0.01
Trim43aQ3TL54 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trim43aQ3TL54 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trim43aQ3TL54 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim43aQ3TL54 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim43aQ3TL54 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC15□□□□□ -0.01
Trim43aQ3TL54 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim43aQ3TL54 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Trim43aQ3TL54 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim43aQ3TL54 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.99□□□□□ -0.01
Trim43aQ3TL54 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
Trim43aQ3TL54 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim43aQ3TL54 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim43aQ3TL54 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim43aQ3TL54 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim43aQ3TL54 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Trim43aQ3TL54 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.99□□□□□ -0.01
Trim43aQ3TL54 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Trim43aQ3TL54 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim43aQ3TL54 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim43aQ3TL54 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.99□□□□□ -0.01
Trim43aQ3TL54 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim43aQ3TL54 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.99□□□□□ -0.01
Trim43aQ3TL54 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim43aQ3TL54 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.99□□□□□ -0.01
Trim43aQ3TL54 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim43aQ3TL54 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.99□□□□□ -0.01
Trim43aQ3TL54 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim43aQ3TL54 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim43aQ3TL54 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim43aQ3TL54 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Trim43aQ3TL54 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim43aQ3TL54 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim43aQ3TL54 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Trim43aQ3TL54 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim43aQ3TL54 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim43aQ3TL54 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim43aQ3TL54 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim43aQ3TL54 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim43aQ3TL54 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim43aQ3TL54 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim43aQ3TL54 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.98□□□□□ -0.01
Trim43aQ3TL54 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim43aQ3TL54 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim43aQ3TL54 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim43aQ3TL54 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim43aQ3TL54 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim43aQ3TL54 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim43aQ3TL54 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim43aQ3TL54 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim43aQ3TL54 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim43aQ3TL54 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.98□□□□□ -0.01
Trim43aQ3TL54 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Trim43aQ3TL54 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Trim43aQ3TL54 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
Trim43aQ3TL54 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
Trim43aQ3TL54 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.98□□□□□ -0.01
Trim43aQ3TL54 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC14.98□□□□□ -0.01
Trim43aQ3TL54 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim43aQ3TL54 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim43aQ3TL54 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.98□□□□□ -0.01
Trim43aQ3TL54 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim43aQ3TL54 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.98□□□□□ -0.01
Trim43aQ3TL54 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim43aQ3TL54 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim43aQ3TL54 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim43aQ3TL54 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms