Protein–RNA interactions for Protein: Q3TJD7

Pdlim7, PDZ and LIM domain protein 7, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim7Q3TJD7 Gm18061-201ENSMUST00000208350 562 ntBASIC15.75■□□□□ 0.11
Pdlim7Q3TJD7 Gm18063-201ENSMUST00000208529 568 ntBASIC15.75■□□□□ 0.11
Pdlim7Q3TJD7 Gm18052-201ENSMUST00000208750 559 ntBASIC15.75■□□□□ 0.11
Pdlim7Q3TJD7 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC15.75■□□□□ 0.11
Pdlim7Q3TJD7 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pdlim7Q3TJD7 Gm24526-201ENSMUST00000082921 158 ntBASIC15.75■□□□□ 0.11
Pdlim7Q3TJD7 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pdlim7Q3TJD7 Ankra2-208ENSMUST00000226100 1476 ntBASIC15.75■□□□□ 0.11
Pdlim7Q3TJD7 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Pdlim7Q3TJD7 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pdlim7Q3TJD7 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pdlim7Q3TJD7 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pdlim7Q3TJD7 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Pdlim7Q3TJD7 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pdlim7Q3TJD7 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Pdlim7Q3TJD7 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pdlim7Q3TJD7 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pdlim7Q3TJD7 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pdlim7Q3TJD7 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pdlim7Q3TJD7 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pdlim7Q3TJD7 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Pdlim7Q3TJD7 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pdlim7Q3TJD7 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pdlim7Q3TJD7 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Pdlim7Q3TJD7 Gm44645-201ENSMUST00000205492 1653 ntBASIC15.74■□□□□ 0.11
Pdlim7Q3TJD7 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pdlim7Q3TJD7 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pdlim7Q3TJD7 Gm10327-201ENSMUST00000105222 1002 ntBASIC15.74■□□□□ 0.11
Pdlim7Q3TJD7 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Pdlim7Q3TJD7 Gm15371-201ENSMUST00000117057 784 ntBASIC15.74■□□□□ 0.11
Pdlim7Q3TJD7 Gm13350-201ENSMUST00000120519 479 ntBASIC15.74■□□□□ 0.11
Pdlim7Q3TJD7 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pdlim7Q3TJD7 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pdlim7Q3TJD7 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC15.74■□□□□ 0.11
Pdlim7Q3TJD7 Gm19184-201ENSMUST00000196798 928 ntBASIC15.74■□□□□ 0.11
Pdlim7Q3TJD7 AC159747.1-201ENSMUST00000219903 265 ntBASIC15.74■□□□□ 0.11
Pdlim7Q3TJD7 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC15.74■□□□□ 0.11
Pdlim7Q3TJD7 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pdlim7Q3TJD7 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pdlim7Q3TJD7 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pdlim7Q3TJD7 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pdlim7Q3TJD7 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.74■□□□□ 0.11
Pdlim7Q3TJD7 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pdlim7Q3TJD7 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Pdlim7Q3TJD7 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Pdlim7Q3TJD7 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pdlim7Q3TJD7 Gm37015-201ENSMUST00000192763 1521 ntBASIC15.73■□□□□ 0.11
Pdlim7Q3TJD7 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pdlim7Q3TJD7 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pdlim7Q3TJD7 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pdlim7Q3TJD7 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
Pdlim7Q3TJD7 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pdlim7Q3TJD7 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pdlim7Q3TJD7 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC15.73■□□□□ 0.11
Pdlim7Q3TJD7 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pdlim7Q3TJD7 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC15.73■□□□□ 0.11
Pdlim7Q3TJD7 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pdlim7Q3TJD7 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pdlim7Q3TJD7 Gm15236-201ENSMUST00000117309 379 ntBASIC15.73■□□□□ 0.11
Pdlim7Q3TJD7 Gm11557-201ENSMUST00000120200 1008 ntBASIC15.73■□□□□ 0.11
Pdlim7Q3TJD7 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC15.73■□□□□ 0.11
Pdlim7Q3TJD7 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC15.73■□□□□ 0.11
Pdlim7Q3TJD7 Gm8927-201ENSMUST00000181978 981 ntBASIC15.73■□□□□ 0.11
Pdlim7Q3TJD7 Gm3222-201ENSMUST00000071282 990 ntBASIC15.73■□□□□ 0.11
Pdlim7Q3TJD7 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pdlim7Q3TJD7 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC15.73■□□□□ 0.11
Pdlim7Q3TJD7 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pdlim7Q3TJD7 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pdlim7Q3TJD7 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC15.73■□□□□ 0.11
Pdlim7Q3TJD7 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Pdlim7Q3TJD7 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pdlim7Q3TJD7 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pdlim7Q3TJD7 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pdlim7Q3TJD7 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pdlim7Q3TJD7 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pdlim7Q3TJD7 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pdlim7Q3TJD7 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pdlim7Q3TJD7 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pdlim7Q3TJD7 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.73■□□□□ 0.11
Pdlim7Q3TJD7 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Pdlim7Q3TJD7 Gm9856-201ENSMUST00000217077 2578 ntBASIC15.73■□□□□ 0.11
Pdlim7Q3TJD7 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pdlim7Q3TJD7 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pdlim7Q3TJD7 AC162938.1-201ENSMUST00000213140 2323 ntBASIC15.72■□□□□ 0.11
Pdlim7Q3TJD7 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pdlim7Q3TJD7 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pdlim7Q3TJD7 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pdlim7Q3TJD7 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Pdlim7Q3TJD7 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
Pdlim7Q3TJD7 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC15.72■□□□□ 0.11
Pdlim7Q3TJD7 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pdlim7Q3TJD7 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC15.72■□□□□ 0.11
Pdlim7Q3TJD7 Gm8810-201ENSMUST00000172895 754 ntBASIC15.72■□□□□ 0.11
Pdlim7Q3TJD7 Gm27516-201ENSMUST00000184237 98 ntBASIC15.72■□□□□ 0.11
Pdlim7Q3TJD7 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pdlim7Q3TJD7 Gm3961-201ENSMUST00000204425 994 ntBASIC15.72■□□□□ 0.11
Pdlim7Q3TJD7 Gm19309-201ENSMUST00000218295 205 ntBASIC15.72■□□□□ 0.11
Pdlim7Q3TJD7 Gm45930-201ENSMUST00000221330 292 ntBASIC15.72■□□□□ 0.11
Pdlim7Q3TJD7 AC166997.1-201ENSMUST00000225122 572 ntBASIC15.72■□□□□ 0.11
Pdlim7Q3TJD7 AC139350.3-201ENSMUST00000226151 420 ntBASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms