Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccbe1Q3MI99 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccbe1Q3MI99 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccbe1Q3MI99 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccbe1Q3MI99 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccbe1Q3MI99 Pck2-205ENSMUST00000226352 2784 ntBASIC12.79□□□□□ -0.36
Ccbe1Q3MI99 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccbe1Q3MI99 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccbe1Q3MI99 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Ccbe1Q3MI99 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccbe1Q3MI99 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccbe1Q3MI99 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Ccbe1Q3MI99 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ccbe1Q3MI99 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccbe1Q3MI99 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccbe1Q3MI99 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ccbe1Q3MI99 Gm37057-201ENSMUST00000192624 1916 ntBASIC12.78□□□□□ -0.36
Ccbe1Q3MI99 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Ccbe1Q3MI99 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccbe1Q3MI99 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccbe1Q3MI99 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccbe1Q3MI99 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccbe1Q3MI99 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccbe1Q3MI99 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ccbe1Q3MI99 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Ccbe1Q3MI99 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Ccbe1Q3MI99 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccbe1Q3MI99 Gm44771-201ENSMUST00000206975 626 ntBASIC12.78□□□□□ -0.36
Ccbe1Q3MI99 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ccbe1Q3MI99 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccbe1Q3MI99 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccbe1Q3MI99 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccbe1Q3MI99 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Ccbe1Q3MI99 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccbe1Q3MI99 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccbe1Q3MI99 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12.78□□□□□ -0.36
Ccbe1Q3MI99 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Ccbe1Q3MI99 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.78□□□□□ -0.36
Ccbe1Q3MI99 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Ccbe1Q3MI99 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccbe1Q3MI99 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
Ccbe1Q3MI99 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccbe1Q3MI99 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
Ccbe1Q3MI99 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccbe1Q3MI99 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.36
Ccbe1Q3MI99 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccbe1Q3MI99 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.77□□□□□ -0.36
Ccbe1Q3MI99 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.77□□□□□ -0.36
Ccbe1Q3MI99 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccbe1Q3MI99 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccbe1Q3MI99 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.77□□□□□ -0.36
Ccbe1Q3MI99 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccbe1Q3MI99 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccbe1Q3MI99 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccbe1Q3MI99 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Ccbe1Q3MI99 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccbe1Q3MI99 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Ccbe1Q3MI99 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccbe1Q3MI99 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC12.77□□□□□ -0.37
Ccbe1Q3MI99 Gm11355-201ENSMUST00000121120 306 ntBASIC12.77□□□□□ -0.37
Ccbe1Q3MI99 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC12.77□□□□□ -0.37
Ccbe1Q3MI99 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC12.77□□□□□ -0.37
Ccbe1Q3MI99 Mir3081-201ENSMUST00000175305 84 ntBASIC12.77□□□□□ -0.37
Ccbe1Q3MI99 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Ccbe1Q3MI99 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC12.77□□□□□ -0.37
Ccbe1Q3MI99 Otx2os1-206ENSMUST00000228153 787 ntBASIC12.77□□□□□ -0.37
Ccbe1Q3MI99 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccbe1Q3MI99 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccbe1Q3MI99 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ccbe1Q3MI99 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccbe1Q3MI99 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.77□□□□□ -0.37
Ccbe1Q3MI99 Map1b-203ENSMUST00000223725 2669 ntBASIC12.77□□□□□ -0.37
Ccbe1Q3MI99 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Ccbe1Q3MI99 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccbe1Q3MI99 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccbe1Q3MI99 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccbe1Q3MI99 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Ccbe1Q3MI99 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccbe1Q3MI99 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ccbe1Q3MI99 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccbe1Q3MI99 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccbe1Q3MI99 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccbe1Q3MI99 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccbe1Q3MI99 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccbe1Q3MI99 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccbe1Q3MI99 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccbe1Q3MI99 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Ccbe1Q3MI99 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.76□□□□□ -0.37
Ccbe1Q3MI99 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccbe1Q3MI99 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccbe1Q3MI99 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccbe1Q3MI99 Gm24589-201ENSMUST00000116692 94 ntBASIC12.76□□□□□ -0.37
Ccbe1Q3MI99 Gm11950-201ENSMUST00000121615 838 ntBASIC12.76□□□□□ -0.37
Ccbe1Q3MI99 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC12.76□□□□□ -0.37
Ccbe1Q3MI99 Gm8584-201ENSMUST00000171982 758 ntBASIC12.76□□□□□ -0.37
Ccbe1Q3MI99 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC12.76□□□□□ -0.37
Ccbe1Q3MI99 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccbe1Q3MI99 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccbe1Q3MI99 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccbe1Q3MI99 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms