Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdx4Q07424 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdx4Q07424 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdx4Q07424 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC10.95□□□□□ -0.66
Cdx4Q07424 Gm22065-201ENSMUST00000103753 110 ntBASIC10.95□□□□□ -0.66
Cdx4Q07424 Gm22066-201ENSMUST00000103761 110 ntBASIC10.95□□□□□ -0.66
Cdx4Q07424 Gm24932-201ENSMUST00000103763 110 ntBASIC10.95□□□□□ -0.66
Cdx4Q07424 Gm24115-201ENSMUST00000103799 110 ntBASIC10.95□□□□□ -0.66
Cdx4Q07424 Gm22190-201ENSMUST00000103827 110 ntBASIC10.95□□□□□ -0.66
Cdx4Q07424 Gm22191-201ENSMUST00000103831 110 ntBASIC10.95□□□□□ -0.66
Cdx4Q07424 Gm24721-201ENSMUST00000103849 110 ntBASIC10.95□□□□□ -0.66
Cdx4Q07424 Gm28018-201ENSMUST00000103869 110 ntBASIC10.95□□□□□ -0.66
Cdx4Q07424 Gm26399-201ENSMUST00000103937 110 ntBASIC10.95□□□□□ -0.66
Cdx4Q07424 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdx4Q07424 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC10.95□□□□□ -0.66
Cdx4Q07424 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC10.95□□□□□ -0.66
Cdx4Q07424 Gm25349-201ENSMUST00000177728 110 ntBASIC10.95□□□□□ -0.66
Cdx4Q07424 Gm23616-201ENSMUST00000177797 110 ntBASIC10.95□□□□□ -0.66
Cdx4Q07424 Gm25871-201ENSMUST00000177816 110 ntBASIC10.95□□□□□ -0.66
Cdx4Q07424 Gm24752-201ENSMUST00000178240 110 ntBASIC10.95□□□□□ -0.66
Cdx4Q07424 Gm24496-201ENSMUST00000178287 110 ntBASIC10.95□□□□□ -0.66
Cdx4Q07424 Gm25649-201ENSMUST00000178476 110 ntBASIC10.95□□□□□ -0.66
Cdx4Q07424 Gm25548-201ENSMUST00000178681 110 ntBASIC10.95□□□□□ -0.66
Cdx4Q07424 Gm23147-201ENSMUST00000178841 110 ntBASIC10.95□□□□□ -0.66
Cdx4Q07424 Gm26095-201ENSMUST00000179270 110 ntBASIC10.95□□□□□ -0.66
Cdx4Q07424 Gm22171-201ENSMUST00000179283 110 ntBASIC10.95□□□□□ -0.66
Cdx4Q07424 Gm23936-201ENSMUST00000179354 110 ntBASIC10.95□□□□□ -0.66
Cdx4Q07424 Gm22619-201ENSMUST00000179516 110 ntBASIC10.95□□□□□ -0.66
Cdx4Q07424 Gm25255-201ENSMUST00000179579 110 ntBASIC10.95□□□□□ -0.66
Cdx4Q07424 Gm24755-201ENSMUST00000179691 110 ntBASIC10.95□□□□□ -0.66
Cdx4Q07424 Gm26506-201ENSMUST00000179692 110 ntBASIC10.95□□□□□ -0.66
Cdx4Q07424 Gm25086-201ENSMUST00000179931 110 ntBASIC10.95□□□□□ -0.66
Cdx4Q07424 Gm23243-201ENSMUST00000180047 110 ntBASIC10.95□□□□□ -0.66
Cdx4Q07424 Gm24659-201ENSMUST00000180212 110 ntBASIC10.95□□□□□ -0.66
Cdx4Q07424 Gm24169-201ENSMUST00000180244 110 ntBASIC10.95□□□□□ -0.66
Cdx4Q07424 Gm23689-201ENSMUST00000180354 110 ntBASIC10.95□□□□□ -0.66
Cdx4Q07424 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC10.95□□□□□ -0.66
Cdx4Q07424 Gm27359-201ENSMUST00000184153 110 ntBASIC10.95□□□□□ -0.66
Cdx4Q07424 Gm27785-201ENSMUST00000184268 110 ntBASIC10.95□□□□□ -0.66
Cdx4Q07424 Gm27466-201ENSMUST00000184396 110 ntBASIC10.95□□□□□ -0.66
Cdx4Q07424 Gm27703-201ENSMUST00000184836 110 ntBASIC10.95□□□□□ -0.66
Cdx4Q07424 Gm38225-201ENSMUST00000194001 393 ntBASIC10.95□□□□□ -0.66
Cdx4Q07424 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cdx4Q07424 AC158982.1-201ENSMUST00000228377 901 ntBASIC10.95□□□□□ -0.66
Cdx4Q07424 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdx4Q07424 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC10.95□□□□□ -0.66
Cdx4Q07424 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
Cdx4Q07424 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdx4Q07424 Gm44291-201ENSMUST00000203102 2865 ntBASIC10.95□□□□□ -0.66
Cdx4Q07424 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdx4Q07424 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdx4Q07424 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdx4Q07424 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdx4Q07424 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cdx4Q07424 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cdx4Q07424 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cdx4Q07424 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Cdx4Q07424 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cdx4Q07424 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdx4Q07424 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdx4Q07424 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Cdx4Q07424 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdx4Q07424 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdx4Q07424 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Cdx4Q07424 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdx4Q07424 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdx4Q07424 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cdx4Q07424 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cdx4Q07424 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdx4Q07424 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdx4Q07424 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdx4Q07424 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdx4Q07424 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Cdx4Q07424 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Cdx4Q07424 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cdx4Q07424 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdx4Q07424 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Cdx4Q07424 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC10.94□□□□□ -0.66
Cdx4Q07424 Gm8749-201ENSMUST00000117737 331 ntBASIC10.94□□□□□ -0.66
Cdx4Q07424 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC10.94□□□□□ -0.66
Cdx4Q07424 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cdx4Q07424 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC10.94□□□□□ -0.66
Cdx4Q07424 Gm9824-201ENSMUST00000178707 561 ntBASIC10.94□□□□□ -0.66
Cdx4Q07424 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Cdx4Q07424 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdx4Q07424 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Cdx4Q07424 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdx4Q07424 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdx4Q07424 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdx4Q07424 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdx4Q07424 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC10.94□□□□□ -0.66
Cdx4Q07424 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdx4Q07424 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdx4Q07424 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cdx4Q07424 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC10.94□□□□□ -0.66
Cdx4Q07424 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdx4Q07424 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdx4Q07424 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Cdx4Q07424 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Cdx4Q07424 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms