Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hspg2Q05793 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Hspg2Q05793 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hspg2Q05793 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hspg2Q05793 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hspg2Q05793 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Hspg2Q05793 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC10.16□□□□□ -0.78
Hspg2Q05793 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Hspg2Q05793 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC10.16□□□□□ -0.78
Hspg2Q05793 Mir433-201ENSMUST00000093564 124 ntBASIC10.16□□□□□ -0.78
Hspg2Q05793 Ssr1-204ENSMUST00000225319 1610 ntBASIC10.16□□□□□ -0.78
Hspg2Q05793 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hspg2Q05793 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hspg2Q05793 Gm29340-201ENSMUST00000188763 3854 ntBASIC10.16□□□□□ -0.78
Hspg2Q05793 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC10.16□□□□□ -0.78
Hspg2Q05793 Gm12846-201ENSMUST00000120431 1373 ntBASIC10.16□□□□□ -0.78
Hspg2Q05793 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hspg2Q05793 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hspg2Q05793 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hspg2Q05793 Gm23200-201ENSMUST00000104379 132 ntBASIC10.16□□□□□ -0.78
Hspg2Q05793 Gm15371-201ENSMUST00000117057 784 ntBASIC10.16□□□□□ -0.78
Hspg2Q05793 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hspg2Q05793 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hspg2Q05793 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC10.16□□□□□ -0.78
Hspg2Q05793 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hspg2Q05793 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hspg2Q05793 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Hspg2Q05793 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hspg2Q05793 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Hspg2Q05793 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Hspg2Q05793 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
Hspg2Q05793 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC10.16□□□□□ -0.78
Hspg2Q05793 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hspg2Q05793 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC10.16□□□□□ -0.78
Hspg2Q05793 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hspg2Q05793 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC10.16□□□□□ -0.78
Hspg2Q05793 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC10.16□□□□□ -0.78
Hspg2Q05793 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC10.16□□□□□ -0.78
Hspg2Q05793 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hspg2Q05793 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Hspg2Q05793 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Hspg2Q05793 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Hspg2Q05793 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hspg2Q05793 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hspg2Q05793 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hspg2Q05793 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hspg2Q05793 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hspg2Q05793 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hspg2Q05793 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC10.15□□□□□ -0.78
Hspg2Q05793 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Hspg2Q05793 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hspg2Q05793 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hspg2Q05793 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Hspg2Q05793 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Hspg2Q05793 AC114543.1-201ENSMUST00000226451 1558 ntBASIC10.15□□□□□ -0.78
Hspg2Q05793 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Hspg2Q05793 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hspg2Q05793 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC10.15□□□□□ -0.78
Hspg2Q05793 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Hspg2Q05793 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Hspg2Q05793 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Hspg2Q05793 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hspg2Q05793 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Hspg2Q05793 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hspg2Q05793 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hspg2Q05793 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC10.15□□□□□ -0.78
Hspg2Q05793 Gm14451-201ENSMUST00000121581 1542 ntBASIC10.15□□□□□ -0.78
Hspg2Q05793 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Hspg2Q05793 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hspg2Q05793 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Hspg2Q05793 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hspg2Q05793 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC10.15□□□□□ -0.78
Hspg2Q05793 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC10.15□□□□□ -0.78
Hspg2Q05793 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Hspg2Q05793 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC10.15□□□□□ -0.78
Hspg2Q05793 Gm45186-201ENSMUST00000206874 478 ntBASIC10.15□□□□□ -0.78
Hspg2Q05793 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hspg2Q05793 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC10.15□□□□□ -0.78
Hspg2Q05793 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hspg2Q05793 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Hspg2Q05793 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Hspg2Q05793 Gm45684-201ENSMUST00000210244 1571 ntBASIC10.15□□□□□ -0.79
Hspg2Q05793 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Hspg2Q05793 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC10.15□□□□□ -0.79
Hspg2Q05793 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC10.15□□□□□ -0.79
Hspg2Q05793 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Hspg2Q05793 Gm13385-201ENSMUST00000121089 220 ntBASIC10.15□□□□□ -0.79
Hspg2Q05793 Gm6222-202ENSMUST00000182143 629 ntBASIC10.15□□□□□ -0.79
Hspg2Q05793 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC10.15□□□□□ -0.79
Hspg2Q05793 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hspg2Q05793 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Hspg2Q05793 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hspg2Q05793 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hspg2Q05793 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC10.14□□□□□ -0.79
Hspg2Q05793 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Hspg2Q05793 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC10.14□□□□□ -0.79
Hspg2Q05793 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hspg2Q05793 Gm24420-201ENSMUST00000176676 59 ntBASIC10.14□□□□□ -0.79
Hspg2Q05793 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC10.14□□□□□ -0.79
Hspg2Q05793 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms