Protein–RNA interactions for Protein: Q01149

Col1a2, Collagen alpha-2(I) chain, mousemouse

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a2Q01149 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col1a2Q01149 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Col1a2Q01149 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col1a2Q01149 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Col1a2Q01149 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Col1a2Q01149 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Col1a2Q01149 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col1a2Q01149 AL645783.1-201ENSMUST00000221416 1832 ntBASIC17.57■□□□□ 0.4
Col1a2Q01149 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col1a2Q01149 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col1a2Q01149 Gm12020-201ENSMUST00000119030 2042 ntBASIC17.57■□□□□ 0.4
Col1a2Q01149 Zkscan14-203ENSMUST00000198959 2243 ntBASIC17.57■□□□□ 0.4
Col1a2Q01149 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col1a2Q01149 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC17.57■□□□□ 0.4
Col1a2Q01149 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Col1a2Q01149 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Col1a2Q01149 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Col1a2Q01149 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col1a2Q01149 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col1a2Q01149 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col1a2Q01149 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col1a2Q01149 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC17.56■□□□□ 0.4
Col1a2Q01149 Gm16342-201ENSMUST00000124025 1025 ntBASIC17.56■□□□□ 0.4
Col1a2Q01149 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Col1a2Q01149 Gm6983-201ENSMUST00000214912 628 ntBASIC17.56■□□□□ 0.4
Col1a2Q01149 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC17.56■□□□□ 0.4
Col1a2Q01149 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Col1a2Q01149 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col1a2Q01149 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col1a2Q01149 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col1a2Q01149 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col1a2Q01149 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col1a2Q01149 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
Col1a2Q01149 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Col1a2Q01149 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col1a2Q01149 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col1a2Q01149 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col1a2Q01149 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC17.55■□□□□ 0.4
Col1a2Q01149 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col1a2Q01149 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Col1a2Q01149 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Col1a2Q01149 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC17.55■□□□□ 0.4
Col1a2Q01149 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col1a2Q01149 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC17.55■□□□□ 0.4
Col1a2Q01149 Mir7085-201ENSMUST00000184353 66 ntBASIC17.55■□□□□ 0.4
Col1a2Q01149 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC17.55■□□□□ 0.4
Col1a2Q01149 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col1a2Q01149 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col1a2Q01149 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC17.55■□□□□ 0.4
Col1a2Q01149 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col1a2Q01149 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC17.55■□□□□ 0.4
Col1a2Q01149 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC17.55■□□□□ 0.4
Col1a2Q01149 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
Col1a2Q01149 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col1a2Q01149 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col1a2Q01149 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC17.55■□□□□ 0.4
Col1a2Q01149 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC17.55■□□□□ 0.4
Col1a2Q01149 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col1a2Q01149 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col1a2Q01149 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col1a2Q01149 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col1a2Q01149 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col1a2Q01149 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Col1a2Q01149 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col1a2Q01149 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col1a2Q01149 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col1a2Q01149 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Col1a2Q01149 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col1a2Q01149 Gm12928-201ENSMUST00000117115 573 ntBASIC17.54■□□□□ 0.4
Col1a2Q01149 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC17.54■□□□□ 0.4
Col1a2Q01149 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Col1a2Q01149 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC17.54■□□□□ 0.4
Col1a2Q01149 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC17.54■□□□□ 0.4
Col1a2Q01149 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Col1a2Q01149 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col1a2Q01149 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col1a2Q01149 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col1a2Q01149 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Col1a2Q01149 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Col1a2Q01149 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col1a2Q01149 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Col1a2Q01149 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Col1a2Q01149 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Col1a2Q01149 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col1a2Q01149 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col1a2Q01149 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
Col1a2Q01149 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col1a2Q01149 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC17.54■□□□□ 0.4
Col1a2Q01149 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col1a2Q01149 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col1a2Q01149 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC17.53■□□□□ 0.4
Col1a2Q01149 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Col1a2Q01149 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC17.53■□□□□ 0.4
Col1a2Q01149 Gm27839-201ENSMUST00000184242 106 ntBASIC17.53■□□□□ 0.4
Col1a2Q01149 Gm5069-202ENSMUST00000192714 1011 ntBASIC17.53■□□□□ 0.4
Col1a2Q01149 Gm5276-201ENSMUST00000196683 1047 ntBASIC17.53■□□□□ 0.4
Col1a2Q01149 Gm7287-201ENSMUST00000205267 602 ntBASIC17.53■□□□□ 0.4
Col1a2Q01149 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col1a2Q01149 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Col1a2Q01149 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms