Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gabpb1Q00420 AA543401-201ENSMUST00000164248 1269 ntBASIC14.37□□□□□ -0.11
Gabpb1Q00420 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.37□□□□□ -0.11
Gabpb1Q00420 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.37□□□□□ -0.11
Gabpb1Q00420 Gm18766-201ENSMUST00000189811 808 ntBASIC14.37□□□□□ -0.11
Gabpb1Q00420 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.37□□□□□ -0.11
Gabpb1Q00420 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.37□□□□□ -0.11
Gabpb1Q00420 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.37□□□□□ -0.11
Gabpb1Q00420 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gabpb1Q00420 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Gabpb1Q00420 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gabpb1Q00420 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Gabpb1Q00420 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gabpb1Q00420 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.37□□□□□ -0.11
Gabpb1Q00420 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Gabpb1Q00420 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gabpb1Q00420 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gabpb1Q00420 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gabpb1Q00420 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gabpb1Q00420 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gabpb1Q00420 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Gabpb1Q00420 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gabpb1Q00420 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gabpb1Q00420 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gabpb1Q00420 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gabpb1Q00420 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Gabpb1Q00420 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gabpb1Q00420 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gabpb1Q00420 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gabpb1Q00420 Gm23935-201ENSMUST00000102303 57 ntBASIC14.36□□□□□ -0.11
Gabpb1Q00420 Gm24270-201ENSMUST00000102326 57 ntBASIC14.36□□□□□ -0.11
Gabpb1Q00420 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Gabpb1Q00420 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.36□□□□□ -0.11
Gabpb1Q00420 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gabpb1Q00420 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gabpb1Q00420 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.36□□□□□ -0.11
Gabpb1Q00420 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gabpb1Q00420 Gm24245-201ENSMUST00000157318 57 ntBASIC14.36□□□□□ -0.11
Gabpb1Q00420 Gm9719-201ENSMUST00000162765 543 ntBASIC14.36□□□□□ -0.11
Gabpb1Q00420 Gm24158-201ENSMUST00000175263 71 ntBASIC14.36□□□□□ -0.11
Gabpb1Q00420 Gm29541-201ENSMUST00000191351 678 ntBASIC14.36□□□□□ -0.11
Gabpb1Q00420 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gabpb1Q00420 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gabpb1Q00420 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.36□□□□□ -0.11
Gabpb1Q00420 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gabpb1Q00420 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gabpb1Q00420 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gabpb1Q00420 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Gabpb1Q00420 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.36□□□□□ -0.11
Gabpb1Q00420 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gabpb1Q00420 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gabpb1Q00420 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Gabpb1Q00420 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.36□□□□□ -0.11
Gabpb1Q00420 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gabpb1Q00420 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Gabpb1Q00420 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gabpb1Q00420 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gabpb1Q00420 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gabpb1Q00420 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gabpb1Q00420 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gabpb1Q00420 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.35□□□□□ -0.11
Gabpb1Q00420 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gabpb1Q00420 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Gabpb1Q00420 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Gabpb1Q00420 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gabpb1Q00420 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gabpb1Q00420 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.35□□□□□ -0.11
Gabpb1Q00420 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gabpb1Q00420 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.35□□□□□ -0.11
Gabpb1Q00420 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gabpb1Q00420 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gabpb1Q00420 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gabpb1Q00420 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gabpb1Q00420 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gabpb1Q00420 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Gabpb1Q00420 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gabpb1Q00420 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.35□□□□□ -0.11
Gabpb1Q00420 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.35□□□□□ -0.11
Gabpb1Q00420 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gabpb1Q00420 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gabpb1Q00420 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.35□□□□□ -0.11
Gabpb1Q00420 Chchd1-203ENSMUST00000224633 557 ntBASIC14.35□□□□□ -0.11
Gabpb1Q00420 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Gabpb1Q00420 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Gabpb1Q00420 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Gabpb1Q00420 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gabpb1Q00420 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gabpb1Q00420 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gabpb1Q00420 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gabpb1Q00420 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Gabpb1Q00420 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
Gabpb1Q00420 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gabpb1Q00420 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gabpb1Q00420 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gabpb1Q00420 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Gabpb1Q00420 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Gabpb1Q00420 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Gabpb1Q00420 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gabpb1Q00420 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.34□□□□□ -0.11
Gabpb1Q00420 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms