Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Smn1P97801 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smn1P97801 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smn1P97801 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smn1P97801 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smn1P97801 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smn1P97801 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Smn1P97801 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smn1P97801 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smn1P97801 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smn1P97801 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.13□□□□□ -0.47
Smn1P97801 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smn1P97801 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smn1P97801 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Smn1P97801 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Smn1P97801 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smn1P97801 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smn1P97801 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Smn1P97801 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smn1P97801 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smn1P97801 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Smn1P97801 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smn1P97801 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smn1P97801 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Smn1P97801 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smn1P97801 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Smn1P97801 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Smn1P97801 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smn1P97801 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smn1P97801 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.12□□□□□ -0.47
Smn1P97801 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Smn1P97801 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smn1P97801 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC12.12□□□□□ -0.47
Smn1P97801 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC12.12□□□□□ -0.47
Smn1P97801 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Smn1P97801 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12.12□□□□□ -0.47
Smn1P97801 Gm10060-201ENSMUST00000212002 111 ntBASIC12.12□□□□□ -0.47
Smn1P97801 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smn1P97801 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC12.12□□□□□ -0.47
Smn1P97801 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Smn1P97801 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smn1P97801 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smn1P97801 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.12□□□□□ -0.47
Smn1P97801 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smn1P97801 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.12□□□□□ -0.47
Smn1P97801 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smn1P97801 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smn1P97801 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Smn1P97801 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smn1P97801 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Smn1P97801 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Smn1P97801 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smn1P97801 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smn1P97801 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Smn1P97801 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smn1P97801 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smn1P97801 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Smn1P97801 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smn1P97801 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smn1P97801 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Smn1P97801 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Smn1P97801 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smn1P97801 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC12.11□□□□□ -0.47
Smn1P97801 Gm16198-201ENSMUST00000118766 670 ntBASIC12.11□□□□□ -0.47
Smn1P97801 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smn1P97801 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Smn1P97801 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC12.11□□□□□ -0.47
Smn1P97801 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC12.11□□□□□ -0.47
Smn1P97801 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC12.11□□□□□ -0.47
Smn1P97801 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC12.11□□□□□ -0.47
Smn1P97801 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smn1P97801 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smn1P97801 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Smn1P97801 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smn1P97801 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smn1P97801 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smn1P97801 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smn1P97801 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Smn1P97801 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smn1P97801 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smn1P97801 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Smn1P97801 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Smn1P97801 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.1□□□□□ -0.47
Smn1P97801 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Smn1P97801 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smn1P97801 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Smn1P97801 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Smn1P97801 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Smn1P97801 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smn1P97801 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Smn1P97801 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smn1P97801 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Smn1P97801 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smn1P97801 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.1□□□□□ -0.47
Smn1P97801 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smn1P97801 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smn1P97801 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smn1P97801 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Smn1P97801 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Smn1P97801 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms