Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Npas1P97459 Gm33142-201ENSMUST00000193913 867 ntBASIC11.88□□□□□ -0.51
Npas1P97459 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC11.88□□□□□ -0.51
Npas1P97459 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Npas1P97459 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Npas1P97459 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Npas1P97459 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Npas1P97459 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Npas1P97459 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Npas1P97459 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Npas1P97459 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Npas1P97459 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC11.88□□□□□ -0.51
Npas1P97459 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Npas1P97459 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Npas1P97459 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Npas1P97459 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Npas1P97459 AC130669.1-201ENSMUST00000228537 1672 ntBASIC11.87□□□□□ -0.51
Npas1P97459 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC11.87□□□□□ -0.51
Npas1P97459 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Npas1P97459 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Npas1P97459 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Npas1P97459 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Npas1P97459 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Npas1P97459 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Npas1P97459 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Npas1P97459 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Npas1P97459 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Npas1P97459 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Npas1P97459 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Npas1P97459 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Npas1P97459 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC11.87□□□□□ -0.51
Npas1P97459 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Npas1P97459 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Npas1P97459 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC11.87□□□□□ -0.51
Npas1P97459 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Npas1P97459 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Npas1P97459 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Npas1P97459 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC11.87□□□□□ -0.51
Npas1P97459 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Npas1P97459 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Npas1P97459 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Npas1P97459 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Npas1P97459 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Npas1P97459 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Npas1P97459 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Npas1P97459 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.86□□□□□ -0.51
Npas1P97459 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Npas1P97459 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Npas1P97459 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Npas1P97459 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Npas1P97459 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Npas1P97459 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Npas1P97459 Gm13418-201ENSMUST00000119097 944 ntBASIC11.86□□□□□ -0.51
Npas1P97459 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Npas1P97459 Gm5682-201ENSMUST00000173402 505 ntBASIC11.86□□□□□ -0.51
Npas1P97459 Gm4535-201ENSMUST00000182274 558 ntBASIC11.86□□□□□ -0.51
Npas1P97459 Gm44357-201ENSMUST00000195897 142 ntBASIC11.86□□□□□ -0.51
Npas1P97459 Gm19658-201ENSMUST00000196231 138 ntBASIC11.86□□□□□ -0.51
Npas1P97459 Gm44367-201ENSMUST00000196836 138 ntBASIC11.86□□□□□ -0.51
Npas1P97459 Gm44350-201ENSMUST00000197197 138 ntBASIC11.86□□□□□ -0.51
Npas1P97459 Gm44390-201ENSMUST00000197533 144 ntBASIC11.86□□□□□ -0.51
Npas1P97459 Gm44313-201ENSMUST00000198018 138 ntBASIC11.86□□□□□ -0.51
Npas1P97459 Gm44486-201ENSMUST00000198508 138 ntBASIC11.86□□□□□ -0.51
Npas1P97459 Gm44314-201ENSMUST00000199263 138 ntBASIC11.86□□□□□ -0.51
Npas1P97459 Gm44394-201ENSMUST00000199558 138 ntBASIC11.86□□□□□ -0.51
Npas1P97459 Gm44484-201ENSMUST00000199873 138 ntBASIC11.86□□□□□ -0.51
Npas1P97459 Gm44466-201ENSMUST00000200264 138 ntBASIC11.86□□□□□ -0.51
Npas1P97459 Gm44359-201ENSMUST00000200671 138 ntBASIC11.86□□□□□ -0.51
Npas1P97459 Rbfox2-207ENSMUST00000227533 1041 ntBASIC11.86□□□□□ -0.51
Npas1P97459 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Npas1P97459 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Npas1P97459 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Npas1P97459 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Npas1P97459 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Npas1P97459 Gm10355-201ENSMUST00000097146 517 ntBASIC11.86□□□□□ -0.51
Npas1P97459 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Npas1P97459 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Npas1P97459 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Npas1P97459 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Npas1P97459 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Npas1P97459 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Npas1P97459 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Npas1P97459 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC11.86□□□□□ -0.51
Npas1P97459 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Npas1P97459 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Npas1P97459 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Npas1P97459 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Npas1P97459 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Npas1P97459 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Npas1P97459 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Npas1P97459 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.86□□□□□ -0.51
Npas1P97459 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Npas1P97459 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Npas1P97459 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Npas1P97459 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Npas1P97459 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Npas1P97459 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Npas1P97459 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Npas1P97459 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Npas1P97459 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms