Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Trim43bP86448 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trim43bP86448 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim43bP86448 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim43bP86448 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
Trim43bP86448 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.55□□□□□ -0.08
Trim43bP86448 Gm16198-201ENSMUST00000118766 670 ntBASIC14.55□□□□□ -0.08
Trim43bP86448 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim43bP86448 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.55□□□□□ -0.08
Trim43bP86448 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.55□□□□□ -0.08
Trim43bP86448 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim43bP86448 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim43bP86448 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim43bP86448 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim43bP86448 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.55□□□□□ -0.08
Trim43bP86448 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim43bP86448 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim43bP86448 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim43bP86448 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.55□□□□□ -0.08
Trim43bP86448 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim43bP86448 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim43bP86448 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim43bP86448 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim43bP86448 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim43bP86448 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
Trim43bP86448 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.54□□□□□ -0.08
Trim43bP86448 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.54□□□□□ -0.08
Trim43bP86448 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim43bP86448 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim43bP86448 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trim43bP86448 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim43bP86448 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim43bP86448 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim43bP86448 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim43bP86448 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim43bP86448 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trim43bP86448 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim43bP86448 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim43bP86448 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trim43bP86448 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim43bP86448 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.54□□□□□ -0.08
Trim43bP86448 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.54□□□□□ -0.08
Trim43bP86448 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.54□□□□□ -0.08
Trim43bP86448 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Trim43bP86448 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim43bP86448 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim43bP86448 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim43bP86448 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Trim43bP86448 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim43bP86448 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim43bP86448 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim43bP86448 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trim43bP86448 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim43bP86448 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim43bP86448 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Trim43bP86448 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim43bP86448 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim43bP86448 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim43bP86448 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim43bP86448 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim43bP86448 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim43bP86448 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim43bP86448 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim43bP86448 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim43bP86448 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Trim43bP86448 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim43bP86448 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim43bP86448 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim43bP86448 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim43bP86448 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim43bP86448 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trim43bP86448 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim43bP86448 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim43bP86448 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.53□□□□□ -0.08
Trim43bP86448 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.53□□□□□ -0.08
Trim43bP86448 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.53□□□□□ -0.08
Trim43bP86448 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.53□□□□□ -0.08
Trim43bP86448 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim43bP86448 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim43bP86448 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim43bP86448 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim43bP86448 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim43bP86448 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim43bP86448 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim43bP86448 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim43bP86448 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim43bP86448 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim43bP86448 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.52□□□□□ -0.08
Trim43bP86448 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
Trim43bP86448 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.52□□□□□ -0.08
Trim43bP86448 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim43bP86448 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim43bP86448 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Trim43bP86448 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.52□□□□□ -0.08
Trim43bP86448 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim43bP86448 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.52□□□□□ -0.08
Trim43bP86448 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim43bP86448 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.52□□□□□ -0.08
Trim43bP86448 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim43bP86448 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms