Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ldb1P70662 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ldb1P70662 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ldb1P70662 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.09□□□□□ -0.15
Ldb1P70662 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ldb1P70662 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ldb1P70662 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ldb1P70662 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.09□□□□□ -0.15
Ldb1P70662 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.09□□□□□ -0.15
Ldb1P70662 Gm12882-201ENSMUST00000121696 517 ntBASIC14.09□□□□□ -0.15
Ldb1P70662 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ldb1P70662 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ldb1P70662 Gm8584-201ENSMUST00000171982 758 ntBASIC14.09□□□□□ -0.15
Ldb1P70662 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ldb1P70662 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ldb1P70662 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Ldb1P70662 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ldb1P70662 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.09□□□□□ -0.15
Ldb1P70662 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ldb1P70662 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ldb1P70662 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ldb1P70662 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ldb1P70662 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ldb1P70662 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ldb1P70662 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ldb1P70662 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ldb1P70662 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ldb1P70662 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ldb1P70662 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ldb1P70662 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ldb1P70662 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ldb1P70662 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ldb1P70662 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ldb1P70662 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ldb1P70662 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ldb1P70662 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ldb1P70662 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.15
Ldb1P70662 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ldb1P70662 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Ldb1P70662 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ldb1P70662 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ldb1P70662 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ldb1P70662 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Ldb1P70662 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ldb1P70662 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ldb1P70662 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Ldb1P70662 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Ldb1P70662 Gm22065-201ENSMUST00000103753 110 ntBASIC14.08□□□□□ -0.16
Ldb1P70662 Gm22066-201ENSMUST00000103761 110 ntBASIC14.08□□□□□ -0.16
Ldb1P70662 Gm24932-201ENSMUST00000103763 110 ntBASIC14.08□□□□□ -0.16
Ldb1P70662 Gm24115-201ENSMUST00000103799 110 ntBASIC14.08□□□□□ -0.16
Ldb1P70662 Gm22190-201ENSMUST00000103827 110 ntBASIC14.08□□□□□ -0.16
Ldb1P70662 Gm22191-201ENSMUST00000103831 110 ntBASIC14.08□□□□□ -0.16
Ldb1P70662 Gm24721-201ENSMUST00000103849 110 ntBASIC14.08□□□□□ -0.16
Ldb1P70662 Gm28018-201ENSMUST00000103869 110 ntBASIC14.08□□□□□ -0.16
Ldb1P70662 Gm26399-201ENSMUST00000103937 110 ntBASIC14.08□□□□□ -0.16
Ldb1P70662 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.08□□□□□ -0.16
Ldb1P70662 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ldb1P70662 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.08□□□□□ -0.16
Ldb1P70662 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.08□□□□□ -0.16
Ldb1P70662 Gm24158-201ENSMUST00000175263 71 ntBASIC14.08□□□□□ -0.16
Ldb1P70662 Gm25349-201ENSMUST00000177728 110 ntBASIC14.08□□□□□ -0.16
Ldb1P70662 Gm23616-201ENSMUST00000177797 110 ntBASIC14.08□□□□□ -0.16
Ldb1P70662 Gm25871-201ENSMUST00000177816 110 ntBASIC14.08□□□□□ -0.16
Ldb1P70662 Gm24752-201ENSMUST00000178240 110 ntBASIC14.08□□□□□ -0.16
Ldb1P70662 Gm24496-201ENSMUST00000178287 110 ntBASIC14.08□□□□□ -0.16
Ldb1P70662 Gm25649-201ENSMUST00000178476 110 ntBASIC14.08□□□□□ -0.16
Ldb1P70662 Gm25548-201ENSMUST00000178681 110 ntBASIC14.08□□□□□ -0.16
Ldb1P70662 Gm23147-201ENSMUST00000178841 110 ntBASIC14.08□□□□□ -0.16
Ldb1P70662 Gm26095-201ENSMUST00000179270 110 ntBASIC14.08□□□□□ -0.16
Ldb1P70662 Gm22171-201ENSMUST00000179283 110 ntBASIC14.08□□□□□ -0.16
Ldb1P70662 Gm23936-201ENSMUST00000179354 110 ntBASIC14.08□□□□□ -0.16
Ldb1P70662 Gm22619-201ENSMUST00000179516 110 ntBASIC14.08□□□□□ -0.16
Ldb1P70662 Gm25255-201ENSMUST00000179579 110 ntBASIC14.08□□□□□ -0.16
Ldb1P70662 Gm24755-201ENSMUST00000179691 110 ntBASIC14.08□□□□□ -0.16
Ldb1P70662 Gm26506-201ENSMUST00000179692 110 ntBASIC14.08□□□□□ -0.16
Ldb1P70662 Gm25086-201ENSMUST00000179931 110 ntBASIC14.08□□□□□ -0.16
Ldb1P70662 Gm23243-201ENSMUST00000180047 110 ntBASIC14.08□□□□□ -0.16
Ldb1P70662 Gm24659-201ENSMUST00000180212 110 ntBASIC14.08□□□□□ -0.16
Ldb1P70662 Gm24169-201ENSMUST00000180244 110 ntBASIC14.08□□□□□ -0.16
Ldb1P70662 Gm23689-201ENSMUST00000180354 110 ntBASIC14.08□□□□□ -0.16
Ldb1P70662 Gm27359-201ENSMUST00000184153 110 ntBASIC14.08□□□□□ -0.16
Ldb1P70662 Gm27631-201ENSMUST00000184163 466 ntBASIC14.08□□□□□ -0.16
Ldb1P70662 Gm27785-201ENSMUST00000184268 110 ntBASIC14.08□□□□□ -0.16
Ldb1P70662 Gm27466-201ENSMUST00000184396 110 ntBASIC14.08□□□□□ -0.16
Ldb1P70662 Gm27703-201ENSMUST00000184836 110 ntBASIC14.08□□□□□ -0.16
Ldb1P70662 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.08□□□□□ -0.16
Ldb1P70662 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.08□□□□□ -0.16
Ldb1P70662 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.08□□□□□ -0.16
Ldb1P70662 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.08□□□□□ -0.16
Ldb1P70662 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ldb1P70662 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ldb1P70662 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ldb1P70662 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ldb1P70662 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ldb1P70662 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ldb1P70662 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ldb1P70662 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ldb1P70662 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ldb1P70662 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 125 ms