Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.26□□□□□ -0.29
Six5P70178 Mir125a-201ENSMUST00000083545 68 ntBASIC13.26□□□□□ -0.29
Six5P70178 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Six5P70178 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Six5P70178 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Six5P70178 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Six5P70178 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Six5P70178 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.26□□□□□ -0.29
Six5P70178 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Six5P70178 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.26□□□□□ -0.29
Six5P70178 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Six5P70178 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Six5P70178 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Six5P70178 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Six5P70178 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Six5P70178 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Six5P70178 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Six5P70178 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Six5P70178 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Six5P70178 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.25□□□□□ -0.29
Six5P70178 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Six5P70178 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Six5P70178 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Six5P70178 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Six5P70178 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Six5P70178 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Six5P70178 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Six5P70178 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.25□□□□□ -0.29
Six5P70178 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.25□□□□□ -0.29
Six5P70178 Gm25948-201ENSMUST00000175334 112 ntBASIC13.25□□□□□ -0.29
Six5P70178 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC13.25□□□□□ -0.29
Six5P70178 Dupd1-202ENSMUST00000224735 548 ntBASIC13.25□□□□□ -0.29
Six5P70178 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Six5P70178 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Six5P70178 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Six5P70178 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.25□□□□□ -0.29
Six5P70178 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Six5P70178 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Six5P70178 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Six5P70178 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Six5P70178 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Six5P70178 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Six5P70178 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Six5P70178 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Six5P70178 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Six5P70178 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Six5P70178 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Six5P70178 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Six5P70178 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Six5P70178 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Six5P70178 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Six5P70178 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Six5P70178 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Six5P70178 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Six5P70178 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Six5P70178 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Six5P70178 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Six5P70178 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Six5P70178 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Six5P70178 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Six5P70178 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Six5P70178 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Six5P70178 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Six5P70178 Gm8410-201ENSMUST00000117225 605 ntBASIC13.24□□□□□ -0.29
Six5P70178 Gm8584-201ENSMUST00000171982 758 ntBASIC13.24□□□□□ -0.29
Six5P70178 Gm27622-201ENSMUST00000183779 60 ntBASIC13.24□□□□□ -0.29
Six5P70178 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.24□□□□□ -0.29
Six5P70178 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Six5P70178 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.24□□□□□ -0.29
Six5P70178 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Six5P70178 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Six5P70178 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Six5P70178 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Six5P70178 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Six5P70178 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Six5P70178 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Six5P70178 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Six5P70178 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Six5P70178 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Six5P70178 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Six5P70178 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Six5P70178 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Six5P70178 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Six5P70178 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Six5P70178 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.23□□□□□ -0.29
Six5P70178 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Six5P70178 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.23□□□□□ -0.29
Six5P70178 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Six5P70178 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Six5P70178 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Six5P70178 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Six5P70178 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Six5P70178 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.23□□□□□ -0.29
Six5P70178 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Six5P70178 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Six5P70178 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Six5P70178 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Six5P70178 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Six5P70178 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Six5P70178 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms