Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Sf3b6P59708 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3b6P59708 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3b6P59708 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3b6P59708 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3b6P59708 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3b6P59708 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3b6P59708 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3b6P59708 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3b6P59708 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3b6P59708 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3b6P59708 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.55□□□□□ -0.4
Sf3b6P59708 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Sf3b6P59708 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3b6P59708 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3b6P59708 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC12.55□□□□□ -0.4
Sf3b6P59708 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3b6P59708 Gm16026-204ENSMUST00000162652 683 ntBASIC12.55□□□□□ -0.4
Sf3b6P59708 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Sf3b6P59708 Gm2272-201ENSMUST00000194903 582 ntBASIC12.55□□□□□ -0.4
Sf3b6P59708 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC12.55□□□□□ -0.4
Sf3b6P59708 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3b6P59708 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3b6P59708 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3b6P59708 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Sf3b6P59708 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3b6P59708 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC12.55□□□□□ -0.4
Sf3b6P59708 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3b6P59708 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Sf3b6P59708 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.55□□□□□ -0.4
Sf3b6P59708 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3b6P59708 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3b6P59708 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3b6P59708 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.55□□□□□ -0.4
Sf3b6P59708 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3b6P59708 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3b6P59708 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3b6P59708 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3b6P59708 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3b6P59708 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3b6P59708 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3b6P59708 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sf3b6P59708 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sf3b6P59708 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sf3b6P59708 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sf3b6P59708 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sf3b6P59708 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Sf3b6P59708 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sf3b6P59708 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sf3b6P59708 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sf3b6P59708 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sf3b6P59708 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sf3b6P59708 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sf3b6P59708 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sf3b6P59708 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sf3b6P59708 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sf3b6P59708 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sf3b6P59708 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sf3b6P59708 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Sf3b6P59708 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sf3b6P59708 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC12.54□□□□□ -0.4
Sf3b6P59708 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sf3b6P59708 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC12.54□□□□□ -0.4
Sf3b6P59708 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC12.54□□□□□ -0.4
Sf3b6P59708 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sf3b6P59708 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC12.54□□□□□ -0.4
Sf3b6P59708 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sf3b6P59708 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC12.54□□□□□ -0.4
Sf3b6P59708 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Sf3b6P59708 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sf3b6P59708 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sf3b6P59708 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sf3b6P59708 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sf3b6P59708 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sf3b6P59708 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Sf3b6P59708 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Sf3b6P59708 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.54□□□□□ -0.4
Sf3b6P59708 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sf3b6P59708 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sf3b6P59708 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Sf3b6P59708 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sf3b6P59708 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sf3b6P59708 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sf3b6P59708 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sf3b6P59708 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sf3b6P59708 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sf3b6P59708 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sf3b6P59708 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sf3b6P59708 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Sf3b6P59708 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Sf3b6P59708 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sf3b6P59708 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sf3b6P59708 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sf3b6P59708 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sf3b6P59708 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Sf3b6P59708 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sf3b6P59708 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sf3b6P59708 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sf3b6P59708 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Sf3b6P59708 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms