Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Msh6P54276 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Msh6P54276 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Msh6P54276 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Msh6P54276 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Msh6P54276 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Msh6P54276 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Msh6P54276 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Msh6P54276 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Msh6P54276 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Msh6P54276 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC17.78■□□□□ 0.44
Msh6P54276 Gm13385-201ENSMUST00000121089 220 ntBASIC17.78■□□□□ 0.44
Msh6P54276 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC17.78■□□□□ 0.44
Msh6P54276 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC17.78■□□□□ 0.44
Msh6P54276 Gm26464-201ENSMUST00000157094 305 ntBASIC17.78■□□□□ 0.44
Msh6P54276 Ighv1-51-201ENSMUST00000192903 354 ntBASIC17.78■□□□□ 0.44
Msh6P54276 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC17.78■□□□□ 0.44
Msh6P54276 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC17.78■□□□□ 0.44
Msh6P54276 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Msh6P54276 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Msh6P54276 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Msh6P54276 Gm37736-201ENSMUST00000193564 2802 ntBASIC17.77■□□□□ 0.44
Msh6P54276 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Msh6P54276 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Msh6P54276 Gm43205-201ENSMUST00000198622 1968 ntBASIC17.77■□□□□ 0.44
Msh6P54276 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Msh6P54276 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Msh6P54276 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Msh6P54276 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Msh6P54276 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Msh6P54276 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Msh6P54276 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Msh6P54276 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Msh6P54276 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Msh6P54276 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Msh6P54276 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Msh6P54276 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Msh6P54276 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Msh6P54276 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Msh6P54276 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Msh6P54276 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Msh6P54276 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Msh6P54276 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Msh6P54276 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Msh6P54276 Gm23931-201ENSMUST00000103842 109 ntBASIC17.77■□□□□ 0.43
Msh6P54276 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC17.77■□□□□ 0.43
Msh6P54276 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC17.77■□□□□ 0.43
Msh6P54276 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC17.77■□□□□ 0.43
Msh6P54276 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Msh6P54276 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Msh6P54276 Gm9257-201ENSMUST00000221254 232 ntBASIC17.77■□□□□ 0.43
Msh6P54276 Gm10012-201ENSMUST00000078252 192 ntBASIC17.77■□□□□ 0.43
Msh6P54276 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Msh6P54276 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Msh6P54276 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Msh6P54276 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Msh6P54276 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Msh6P54276 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Msh6P54276 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Msh6P54276 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Msh6P54276 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Msh6P54276 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Msh6P54276 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Msh6P54276 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Msh6P54276 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Msh6P54276 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Msh6P54276 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Msh6P54276 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Msh6P54276 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Msh6P54276 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Msh6P54276 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Msh6P54276 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Msh6P54276 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Msh6P54276 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC17.76■□□□□ 0.43
Msh6P54276 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
Msh6P54276 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Msh6P54276 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Msh6P54276 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC17.76■□□□□ 0.43
Msh6P54276 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC17.76■□□□□ 0.43
Msh6P54276 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Msh6P54276 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC17.76■□□□□ 0.43
Msh6P54276 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC17.76■□□□□ 0.43
Msh6P54276 AC131690.1-201ENSMUST00000218406 374 ntBASIC17.76■□□□□ 0.43
Msh6P54276 AC122459.1-201ENSMUST00000228373 885 ntBASIC17.76■□□□□ 0.43
Msh6P54276 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Msh6P54276 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Msh6P54276 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Msh6P54276 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Msh6P54276 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Msh6P54276 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC17.75■□□□□ 0.43
Msh6P54276 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Msh6P54276 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Msh6P54276 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Msh6P54276 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Msh6P54276 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Msh6P54276 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Msh6P54276 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.75■□□□□ 0.43
Msh6P54276 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Msh6P54276 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Msh6P54276 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms