Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox1P53783 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox1P53783 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox1P53783 Gm4909-201ENSMUST00000118749 794 ntBASIC14.35□□□□□ -0.11
Sox1P53783 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sox1P53783 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.35□□□□□ -0.11
Sox1P53783 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC14.35□□□□□ -0.11
Sox1P53783 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC14.35□□□□□ -0.11
Sox1P53783 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC14.35□□□□□ -0.11
Sox1P53783 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC14.35□□□□□ -0.11
Sox1P53783 Gm25927-201ENSMUST00000175058 117 ntBASIC14.35□□□□□ -0.11
Sox1P53783 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Sox1P53783 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC14.35□□□□□ -0.11
Sox1P53783 Gm18556-201ENSMUST00000219748 1031 ntBASIC14.35□□□□□ -0.11
Sox1P53783 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox1P53783 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Sox1P53783 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Sox1P53783 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sox1P53783 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox1P53783 Gm8706-201ENSMUST00000197372 1491 ntBASIC14.35□□□□□ -0.11
Sox1P53783 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox1P53783 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox1P53783 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox1P53783 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox1P53783 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.35□□□□□ -0.11
Sox1P53783 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox1P53783 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.35□□□□□ -0.11
Sox1P53783 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox1P53783 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sox1P53783 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox1P53783 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox1P53783 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox1P53783 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox1P53783 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.34□□□□□ -0.11
Sox1P53783 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox1P53783 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox1P53783 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Sox1P53783 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox1P53783 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox1P53783 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC14.34□□□□□ -0.11
Sox1P53783 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Sox1P53783 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox1P53783 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox1P53783 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox1P53783 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sox1P53783 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox1P53783 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Sox1P53783 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox1P53783 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox1P53783 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Sox1P53783 Gm8213-201ENSMUST00000118191 441 ntBASIC14.34□□□□□ -0.11
Sox1P53783 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox1P53783 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox1P53783 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sox1P53783 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sox1P53783 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.34□□□□□ -0.11
Sox1P53783 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC14.34□□□□□ -0.11
Sox1P53783 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.34□□□□□ -0.11
Sox1P53783 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sox1P53783 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC14.34□□□□□ -0.11
Sox1P53783 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox1P53783 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Sox1P53783 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox1P53783 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox1P53783 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Sox1P53783 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox1P53783 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox1P53783 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox1P53783 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sox1P53783 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox1P53783 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox1P53783 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC14.34□□□□□ -0.11
Sox1P53783 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox1P53783 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Sox1P53783 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Sox1P53783 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox1P53783 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sox1P53783 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Sox1P53783 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sox1P53783 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC14.33□□□□□ -0.11
Sox1P53783 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sox1P53783 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sox1P53783 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox1P53783 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Sox1P53783 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox1P53783 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox1P53783 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox1P53783 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Sox1P53783 Gm13297-201ENSMUST00000120205 934 ntBASIC14.33□□□□□ -0.12
Sox1P53783 Gm11658-201ENSMUST00000120913 1008 ntBASIC14.33□□□□□ -0.12
Sox1P53783 Gm6152-201ENSMUST00000151704 340 ntBASIC14.33□□□□□ -0.12
Sox1P53783 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC14.33□□□□□ -0.12
Sox1P53783 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC14.33□□□□□ -0.12
Sox1P53783 Gm9726-201ENSMUST00000180321 678 ntBASIC14.33□□□□□ -0.12
Sox1P53783 Gm2467-201ENSMUST00000182266 1010 ntBASIC14.33□□□□□ -0.12
Sox1P53783 Gm6981-201ENSMUST00000182467 1008 ntBASIC14.33□□□□□ -0.12
Sox1P53783 Gm38223-201ENSMUST00000194484 695 ntBASIC14.33□□□□□ -0.12
Sox1P53783 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC14.33□□□□□ -0.12
Sox1P53783 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sox1P53783 Gm44985-201ENSMUST00000206202 1016 ntBASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms