Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hmga2P52927 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hmga2P52927 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC12.04□□□□□ -0.48
Hmga2P52927 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hmga2P52927 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hmga2P52927 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Hmga2P52927 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hmga2P52927 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hmga2P52927 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hmga2P52927 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hmga2P52927 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Hmga2P52927 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hmga2P52927 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Hmga2P52927 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hmga2P52927 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Hmga2P52927 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Hmga2P52927 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hmga2P52927 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hmga2P52927 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Hmga2P52927 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Hmga2P52927 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Hmga2P52927 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hmga2P52927 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hmga2P52927 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hmga2P52927 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Hmga2P52927 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hmga2P52927 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Hmga2P52927 Gm13036-201ENSMUST00000117799 748 ntBASIC12.03□□□□□ -0.48
Hmga2P52927 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC12.03□□□□□ -0.48
Hmga2P52927 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hmga2P52927 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hmga2P52927 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hmga2P52927 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.03□□□□□ -0.48
Hmga2P52927 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.03□□□□□ -0.48
Hmga2P52927 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hmga2P52927 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hmga2P52927 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Hmga2P52927 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hmga2P52927 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Hmga2P52927 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hmga2P52927 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hmga2P52927 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hmga2P52927 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hmga2P52927 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hmga2P52927 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hmga2P52927 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hmga2P52927 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Hmga2P52927 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Hmga2P52927 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Hmga2P52927 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Hmga2P52927 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hmga2P52927 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hmga2P52927 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hmga2P52927 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.02□□□□□ -0.48
Hmga2P52927 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hmga2P52927 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.02□□□□□ -0.48
Hmga2P52927 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Hmga2P52927 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hmga2P52927 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Hmga2P52927 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hmga2P52927 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hmga2P52927 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hmga2P52927 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hmga2P52927 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.02□□□□□ -0.49
Hmga2P52927 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hmga2P52927 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hmga2P52927 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hmga2P52927 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hmga2P52927 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC12.02□□□□□ -0.49
Hmga2P52927 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC12.02□□□□□ -0.49
Hmga2P52927 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hmga2P52927 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hmga2P52927 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hmga2P52927 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hmga2P52927 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Hmga2P52927 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hmga2P52927 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hmga2P52927 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hmga2P52927 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hmga2P52927 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.02□□□□□ -0.49
Hmga2P52927 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hmga2P52927 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Hmga2P52927 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hmga2P52927 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hmga2P52927 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hmga2P52927 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmga2P52927 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hmga2P52927 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmga2P52927 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmga2P52927 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmga2P52927 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.01□□□□□ -0.49
Hmga2P52927 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Hmga2P52927 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmga2P52927 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Hmga2P52927 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.01□□□□□ -0.49
Hmga2P52927 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hmga2P52927 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmga2P52927 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmga2P52927 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Hmga2P52927 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms