Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
GdnfP48540 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
GdnfP48540 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
GdnfP48540 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
GdnfP48540 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.39□□□□□ -0.43
GdnfP48540 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
GdnfP48540 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
GdnfP48540 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
GdnfP48540 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
GdnfP48540 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
GdnfP48540 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
GdnfP48540 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
GdnfP48540 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
GdnfP48540 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
GdnfP48540 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC12.39□□□□□ -0.43
GdnfP48540 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
GdnfP48540 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
GdnfP48540 Gm5177-201ENSMUST00000183092 997 ntBASIC12.39□□□□□ -0.43
GdnfP48540 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
GdnfP48540 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
GdnfP48540 Gm44945-201ENSMUST00000206764 1187 ntBASIC12.39□□□□□ -0.43
GdnfP48540 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
GdnfP48540 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
GdnfP48540 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
GdnfP48540 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
GdnfP48540 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
GdnfP48540 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
GdnfP48540 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
GdnfP48540 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
GdnfP48540 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
GdnfP48540 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
GdnfP48540 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
GdnfP48540 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
GdnfP48540 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
GdnfP48540 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GdnfP48540 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
GdnfP48540 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC12.38□□□□□ -0.43
GdnfP48540 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.38□□□□□ -0.43
GdnfP48540 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.38□□□□□ -0.43
GdnfP48540 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.38□□□□□ -0.43
GdnfP48540 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
GdnfP48540 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GdnfP48540 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GdnfP48540 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GdnfP48540 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
GdnfP48540 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
GdnfP48540 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
GdnfP48540 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
GdnfP48540 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
GdnfP48540 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC12.38□□□□□ -0.43
GdnfP48540 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
GdnfP48540 Gm6443-201ENSMUST00000203599 874 ntBASIC12.38□□□□□ -0.43
GdnfP48540 AC090659.1-201ENSMUST00000224334 768 ntBASIC12.38□□□□□ -0.43
GdnfP48540 CT010506.4-201ENSMUST00000225457 351 ntBASIC12.38□□□□□ -0.43
GdnfP48540 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC12.38□□□□□ -0.43
GdnfP48540 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
GdnfP48540 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.38□□□□□ -0.43
GdnfP48540 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
GdnfP48540 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GdnfP48540 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
GdnfP48540 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
GdnfP48540 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GdnfP48540 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
GdnfP48540 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GdnfP48540 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
GdnfP48540 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GdnfP48540 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.38□□□□□ -0.43
GdnfP48540 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GdnfP48540 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
GdnfP48540 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GdnfP48540 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
GdnfP48540 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
GdnfP48540 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
GdnfP48540 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
GdnfP48540 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
GdnfP48540 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
GdnfP48540 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.37□□□□□ -0.43
GdnfP48540 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
GdnfP48540 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
GdnfP48540 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
GdnfP48540 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
GdnfP48540 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
GdnfP48540 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
GdnfP48540 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
GdnfP48540 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
GdnfP48540 Gm16198-201ENSMUST00000118766 670 ntBASIC12.37□□□□□ -0.43
GdnfP48540 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
GdnfP48540 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
GdnfP48540 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
GdnfP48540 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12.37□□□□□ -0.43
GdnfP48540 Gm45747-201ENSMUST00000212203 999 ntBASIC12.37□□□□□ -0.43
GdnfP48540 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
GdnfP48540 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
GdnfP48540 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC12.37□□□□□ -0.43
GdnfP48540 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
GdnfP48540 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
GdnfP48540 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
GdnfP48540 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
GdnfP48540 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
GdnfP48540 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms