Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
Prox1P48437 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prox1P48437 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.59□□□□□ -0.23
Prox1P48437 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.59□□□□□ -0.23
Prox1P48437 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prox1P48437 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prox1P48437 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Prox1P48437 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prox1P48437 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Prox1P48437 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Prox1P48437 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prox1P48437 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prox1P48437 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prox1P48437 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
Prox1P48437 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prox1P48437 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prox1P48437 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Prox1P48437 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.59□□□□□ -0.23
Prox1P48437 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prox1P48437 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Prox1P48437 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Prox1P48437 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Prox1P48437 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Prox1P48437 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Prox1P48437 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Prox1P48437 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Prox1P48437 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Prox1P48437 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.58□□□□□ -0.23
Prox1P48437 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Prox1P48437 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.58□□□□□ -0.24
Prox1P48437 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Prox1P48437 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Prox1P48437 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Prox1P48437 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
Prox1P48437 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Prox1P48437 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Prox1P48437 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Prox1P48437 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Prox1P48437 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
Prox1P48437 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.58□□□□□ -0.24
Prox1P48437 Gm7862-201ENSMUST00000121461 292 ntBASIC13.58□□□□□ -0.24
Prox1P48437 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Prox1P48437 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC13.58□□□□□ -0.24
Prox1P48437 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Prox1P48437 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Prox1P48437 Gm2651-201ENSMUST00000203560 838 ntBASIC13.58□□□□□ -0.24
Prox1P48437 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC13.58□□□□□ -0.24
Prox1P48437 AV026068-213ENSMUST00000223675 1171 ntBASIC13.58□□□□□ -0.24
Prox1P48437 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Prox1P48437 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Prox1P48437 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Prox1P48437 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Prox1P48437 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Prox1P48437 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.58□□□□□ -0.24
Prox1P48437 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Prox1P48437 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Prox1P48437 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Prox1P48437 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
Prox1P48437 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Prox1P48437 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.58□□□□□ -0.24
Prox1P48437 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.58□□□□□ -0.24
Prox1P48437 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Prox1P48437 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Prox1P48437 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Prox1P48437 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Prox1P48437 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Prox1P48437 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Prox1P48437 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.57□□□□□ -0.24
Prox1P48437 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.57□□□□□ -0.24
Prox1P48437 Gm8749-201ENSMUST00000117737 331 ntBASIC13.57□□□□□ -0.24
Prox1P48437 Gm13464-201ENSMUST00000119418 935 ntBASIC13.57□□□□□ -0.24
Prox1P48437 Gm6184-201ENSMUST00000120403 1261 ntBASIC13.57□□□□□ -0.24
Prox1P48437 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Prox1P48437 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Prox1P48437 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Prox1P48437 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.57□□□□□ -0.24
Prox1P48437 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Prox1P48437 Gm18206-201ENSMUST00000207027 926 ntBASIC13.57□□□□□ -0.24
Prox1P48437 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Prox1P48437 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Prox1P48437 Gm5867-201ENSMUST00000063197 592 ntBASIC13.57□□□□□ -0.24
Prox1P48437 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.57□□□□□ -0.24
Prox1P48437 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Prox1P48437 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Prox1P48437 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Prox1P48437 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
Prox1P48437 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Prox1P48437 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Prox1P48437 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Prox1P48437 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Prox1P48437 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Prox1P48437 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Prox1P48437 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Prox1P48437 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Prox1P48437 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Prox1P48437 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.57□□□□□ -0.24
Prox1P48437 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Prox1P48437 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Prox1P48437 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Prox1P48437 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms