Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx3P48381 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx3P48381 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx3P48381 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx3P48381 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx3P48381 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Rfx3P48381 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx3P48381 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.78□□□□□ -0.36
Rfx3P48381 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx3P48381 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Rfx3P48381 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx3P48381 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx3P48381 Gm15467-201ENSMUST00000120582 445 ntBASIC12.78□□□□□ -0.36
Rfx3P48381 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Rfx3P48381 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Rfx3P48381 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Rfx3P48381 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx3P48381 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.78□□□□□ -0.36
Rfx3P48381 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx3P48381 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Rfx3P48381 Gm5479-201ENSMUST00000160578 435 ntBASIC12.78□□□□□ -0.36
Rfx3P48381 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.78□□□□□ -0.36
Rfx3P48381 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC12.78□□□□□ -0.36
Rfx3P48381 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx3P48381 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx3P48381 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Rfx3P48381 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx3P48381 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx3P48381 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx3P48381 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx3P48381 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx3P48381 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx3P48381 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx3P48381 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx3P48381 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx3P48381 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx3P48381 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx3P48381 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rfx3P48381 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rfx3P48381 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Rfx3P48381 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Rfx3P48381 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rfx3P48381 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Rfx3P48381 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.36
Rfx3P48381 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rfx3P48381 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rfx3P48381 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Rfx3P48381 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rfx3P48381 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rfx3P48381 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rfx3P48381 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rfx3P48381 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.77□□□□□ -0.37
Rfx3P48381 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rfx3P48381 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Rfx3P48381 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Rfx3P48381 Gm6226-201ENSMUST00000117765 1146 ntBASIC12.77□□□□□ -0.37
Rfx3P48381 Gm11543-201ENSMUST00000120758 370 ntBASIC12.77□□□□□ -0.37
Rfx3P48381 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.77□□□□□ -0.37
Rfx3P48381 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rfx3P48381 Rpph1-201ENSMUST00000175096 319 ntBASIC12.77□□□□□ -0.37
Rfx3P48381 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rfx3P48381 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC12.77□□□□□ -0.37
Rfx3P48381 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rfx3P48381 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC12.77□□□□□ -0.37
Rfx3P48381 Bloc1s5-203ENSMUST00000224902 612 ntBASIC12.77□□□□□ -0.37
Rfx3P48381 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rfx3P48381 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rfx3P48381 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rfx3P48381 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rfx3P48381 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rfx3P48381 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rfx3P48381 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rfx3P48381 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.77□□□□□ -0.37
Rfx3P48381 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rfx3P48381 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
Rfx3P48381 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rfx3P48381 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rfx3P48381 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rfx3P48381 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Rfx3P48381 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rfx3P48381 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.77□□□□□ -0.37
Rfx3P48381 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rfx3P48381 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Rfx3P48381 Gm9252-201ENSMUST00000172364 1602 ntBASIC12.77□□□□□ -0.37
Rfx3P48381 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rfx3P48381 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfx3P48381 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfx3P48381 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfx3P48381 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Rfx3P48381 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.76□□□□□ -0.37
Rfx3P48381 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfx3P48381 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rfx3P48381 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.76□□□□□ -0.37
Rfx3P48381 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfx3P48381 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.76□□□□□ -0.37
Rfx3P48381 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC12.76□□□□□ -0.37
Rfx3P48381 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.76□□□□□ -0.37
Rfx3P48381 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.76□□□□□ -0.37
Rfx3P48381 Gm15483-201ENSMUST00000120338 456 ntBASIC12.76□□□□□ -0.37
Rfx3P48381 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms