Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.36□□□□□ -0.11
Vps4bP46467 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps4bP46467 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps4bP46467 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Vps4bP46467 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vps4bP46467 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
Vps4bP46467 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps4bP46467 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps4bP46467 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Vps4bP46467 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps4bP46467 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Vps4bP46467 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps4bP46467 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps4bP46467 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps4bP46467 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps4bP46467 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Vps4bP46467 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vps4bP46467 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps4bP46467 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps4bP46467 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps4bP46467 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps4bP46467 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps4bP46467 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Vps4bP46467 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps4bP46467 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Vps4bP46467 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps4bP46467 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vps4bP46467 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.35□□□□□ -0.11
Vps4bP46467 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Vps4bP46467 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps4bP46467 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps4bP46467 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.35□□□□□ -0.11
Vps4bP46467 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.35□□□□□ -0.11
Vps4bP46467 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.35□□□□□ -0.11
Vps4bP46467 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vps4bP46467 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.35□□□□□ -0.11
Vps4bP46467 Gm44872-201ENSMUST00000207864 420 ntBASIC14.35□□□□□ -0.11
Vps4bP46467 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.35□□□□□ -0.11
Vps4bP46467 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.35□□□□□ -0.11
Vps4bP46467 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps4bP46467 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps4bP46467 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.35□□□□□ -0.11
Vps4bP46467 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps4bP46467 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps4bP46467 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps4bP46467 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps4bP46467 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps4bP46467 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.35□□□□□ -0.11
Vps4bP46467 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps4bP46467 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vps4bP46467 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps4bP46467 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.35□□□□□ -0.11
Vps4bP46467 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps4bP46467 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vps4bP46467 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vps4bP46467 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps4bP46467 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps4bP46467 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps4bP46467 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Vps4bP46467 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps4bP46467 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps4bP46467 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps4bP46467 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps4bP46467 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vps4bP46467 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps4bP46467 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Vps4bP46467 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps4bP46467 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps4bP46467 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vps4bP46467 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Vps4bP46467 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.34□□□□□ -0.11
Vps4bP46467 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vps4bP46467 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps4bP46467 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vps4bP46467 Gm20553-201ENSMUST00000204205 844 ntBASIC14.34□□□□□ -0.11
Vps4bP46467 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps4bP46467 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.34□□□□□ -0.11
Vps4bP46467 Gm10175-201ENSMUST00000086013 645 ntBASIC14.34□□□□□ -0.11
Vps4bP46467 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Vps4bP46467 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.34□□□□□ -0.11
Vps4bP46467 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vps4bP46467 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps4bP46467 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps4bP46467 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps4bP46467 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vps4bP46467 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vps4bP46467 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.33□□□□□ -0.12
Vps4bP46467 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.33□□□□□ -0.12
Vps4bP46467 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Vps4bP46467 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vps4bP46467 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.33□□□□□ -0.12
Vps4bP46467 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vps4bP46467 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.33□□□□□ -0.12
Vps4bP46467 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.33□□□□□ -0.12
Vps4bP46467 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.33□□□□□ -0.12
Vps4bP46467 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps4bP46467 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.33□□□□□ -0.12
Vps4bP46467 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vps4bP46467 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps4bP46467 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms