Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfsf4P43488 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfsf4P43488 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Tnfsf4P43488 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Tnfsf4P43488 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfsf4P43488 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfsf4P43488 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.65□□□□□ -0.22
Tnfsf4P43488 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.65□□□□□ -0.22
Tnfsf4P43488 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfsf4P43488 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.65□□□□□ -0.22
Tnfsf4P43488 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfsf4P43488 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfsf4P43488 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfsf4P43488 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfsf4P43488 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Tnfsf4P43488 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfsf4P43488 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfsf4P43488 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfsf4P43488 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Tnfsf4P43488 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.23
Tnfsf4P43488 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Tnfsf4P43488 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfsf4P43488 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfsf4P43488 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfsf4P43488 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfsf4P43488 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfsf4P43488 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Tnfsf4P43488 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfsf4P43488 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfsf4P43488 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfsf4P43488 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfsf4P43488 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfsf4P43488 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfsf4P43488 AC131586.3-201ENSMUST00000228355 1367 ntBASIC13.64□□□□□ -0.23
Tnfsf4P43488 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Tnfsf4P43488 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfsf4P43488 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.64□□□□□ -0.23
Tnfsf4P43488 Gm12882-201ENSMUST00000121696 517 ntBASIC13.64□□□□□ -0.23
Tnfsf4P43488 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfsf4P43488 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.64□□□□□ -0.23
Tnfsf4P43488 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfsf4P43488 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfsf4P43488 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Tnfsf4P43488 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.64□□□□□ -0.23
Tnfsf4P43488 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfsf4P43488 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfsf4P43488 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfsf4P43488 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfsf4P43488 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.64□□□□□ -0.23
Tnfsf4P43488 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfsf4P43488 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfsf4P43488 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfsf4P43488 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfsf4P43488 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfsf4P43488 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfsf4P43488 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfsf4P43488 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfsf4P43488 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfsf4P43488 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfsf4P43488 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.63□□□□□ -0.23
Tnfsf4P43488 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfsf4P43488 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfsf4P43488 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfsf4P43488 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.63□□□□□ -0.23
Tnfsf4P43488 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfsf4P43488 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.63□□□□□ -0.23
Tnfsf4P43488 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfsf4P43488 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.63□□□□□ -0.23
Tnfsf4P43488 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.63□□□□□ -0.23
Tnfsf4P43488 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.63□□□□□ -0.23
Tnfsf4P43488 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.63□□□□□ -0.23
Tnfsf4P43488 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.63□□□□□ -0.23
Tnfsf4P43488 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.63□□□□□ -0.23
Tnfsf4P43488 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfsf4P43488 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfsf4P43488 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfsf4P43488 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfsf4P43488 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfsf4P43488 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfsf4P43488 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Tnfsf4P43488 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfsf4P43488 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfsf4P43488 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfsf4P43488 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.63□□□□□ -0.23
Tnfsf4P43488 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfsf4P43488 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfsf4P43488 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.63□□□□□ -0.23
Tnfsf4P43488 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfsf4P43488 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Tnfsf4P43488 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfsf4P43488 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfsf4P43488 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.63□□□□□ -0.23
Tnfsf4P43488 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Tnfsf4P43488 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Tnfsf4P43488 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Tnfsf4P43488 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfsf4P43488 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfsf4P43488 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfsf4P43488 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfsf4P43488 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms