Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
HttP42859 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
HttP42859 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
HttP42859 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
HttP42859 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
HttP42859 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HttP42859 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HttP42859 Gm13408-201ENSMUST00000119822 798 ntBASIC14.7□□□□□ -0.06
HttP42859 Gm13935-201ENSMUST00000121859 798 ntBASIC14.7□□□□□ -0.06
HttP42859 Gm15276-201ENSMUST00000145953 498 ntBASIC14.7□□□□□ -0.06
HttP42859 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
HttP42859 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC14.7□□□□□ -0.06
HttP42859 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
HttP42859 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
HttP42859 Gm43423-201ENSMUST00000198390 2094 ntBASIC14.7□□□□□ -0.06
HttP42859 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HttP42859 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HttP42859 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HttP42859 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HttP42859 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HttP42859 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HttP42859 Gm9678-201ENSMUST00000198979 1149 ntBASIC14.7□□□□□ -0.06
HttP42859 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
HttP42859 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HttP42859 Gm18630-201ENSMUST00000222109 1397 ntBASIC14.7□□□□□ -0.06
HttP42859 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HttP42859 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HttP42859 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.7□□□□□ -0.06
HttP42859 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
HttP42859 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC14.7□□□□□ -0.06
HttP42859 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
HttP42859 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HttP42859 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HttP42859 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC14.69□□□□□ -0.06
HttP42859 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.69□□□□□ -0.06
HttP42859 Gm23699-201ENSMUST00000158835 135 ntBASIC14.69□□□□□ -0.06
HttP42859 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC14.69□□□□□ -0.06
HttP42859 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HttP42859 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.69□□□□□ -0.06
HttP42859 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HttP42859 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
HttP42859 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HttP42859 Gm10782-202ENSMUST00000223775 1480 ntBASIC14.69□□□□□ -0.06
HttP42859 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HttP42859 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HttP42859 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HttP42859 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC14.69□□□□□ -0.06
HttP42859 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC14.69□□□□□ -0.06
HttP42859 AC131330.1-201ENSMUST00000227814 1015 ntBASIC14.69□□□□□ -0.06
HttP42859 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HttP42859 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.69□□□□□ -0.06
HttP42859 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
HttP42859 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HttP42859 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
HttP42859 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
HttP42859 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
HttP42859 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
HttP42859 AC141438.2-201ENSMUST00000215068 271 ntBASIC14.68□□□□□ -0.06
HttP42859 AC122876.1-201ENSMUST00000217619 825 ntBASIC14.68□□□□□ -0.06
HttP42859 AC135114.1-201ENSMUST00000228682 270 ntBASIC14.68□□□□□ -0.06
HttP42859 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
HttP42859 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
HttP42859 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HttP42859 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HttP42859 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HttP42859 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC14.68□□□□□ -0.06
HttP42859 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC14.68□□□□□ -0.06
HttP42859 Gm28450-201ENSMUST00000187349 638 ntBASIC14.68□□□□□ -0.06
HttP42859 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
HttP42859 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
HttP42859 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HttP42859 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HttP42859 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
HttP42859 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HttP42859 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HttP42859 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
HttP42859 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HttP42859 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HttP42859 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HttP42859 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC14.68□□□□□ -0.06
HttP42859 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC14.68□□□□□ -0.06
HttP42859 Gm4607-201ENSMUST00000206649 577 ntBASIC14.68□□□□□ -0.06
HttP42859 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC14.68□□□□□ -0.06
HttP42859 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC14.68□□□□□ -0.06
HttP42859 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HttP42859 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HttP42859 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
HttP42859 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
HttP42859 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HttP42859 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HttP42859 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
HttP42859 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HttP42859 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HttP42859 Gm8194-201ENSMUST00000159783 859 ntBASIC14.67□□□□□ -0.06
HttP42859 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC14.67□□□□□ -0.06
HttP42859 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HttP42859 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC14.67□□□□□ -0.06
HttP42859 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HttP42859 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC14.67□□□□□ -0.06
HttP42859 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms