Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Abca1P41233 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Abca1P41233 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Abca1P41233 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC11.78□□□□□ -0.52
Abca1P41233 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Abca1P41233 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Abca1P41233 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Abca1P41233 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Abca1P41233 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Abca1P41233 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Abca1P41233 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Abca1P41233 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC11.78□□□□□ -0.52
Abca1P41233 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Abca1P41233 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Abca1P41233 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Abca1P41233 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Abca1P41233 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Abca1P41233 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Abca1P41233 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Abca1P41233 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC11.77□□□□□ -0.52
Abca1P41233 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC11.77□□□□□ -0.52
Abca1P41233 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Abca1P41233 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Abca1P41233 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Abca1P41233 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Abca1P41233 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Abca1P41233 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Abca1P41233 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Abca1P41233 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Abca1P41233 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Abca1P41233 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Abca1P41233 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Abca1P41233 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Abca1P41233 Gm10584-201ENSMUST00000207036 2628 ntBASIC11.77□□□□□ -0.53
Abca1P41233 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Abca1P41233 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Abca1P41233 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Abca1P41233 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Abca1P41233 Gm12960-201ENSMUST00000120017 1066 ntBASIC11.77□□□□□ -0.53
Abca1P41233 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Abca1P41233 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC11.77□□□□□ -0.53
Abca1P41233 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Abca1P41233 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Abca1P41233 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC11.77□□□□□ -0.53
Abca1P41233 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Abca1P41233 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Abca1P41233 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Abca1P41233 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Abca1P41233 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC11.77□□□□□ -0.53
Abca1P41233 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Abca1P41233 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Abca1P41233 Gm43195-201ENSMUST00000200614 2332 ntBASIC11.76□□□□□ -0.53
Abca1P41233 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Abca1P41233 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Abca1P41233 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC11.76□□□□□ -0.53
Abca1P41233 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Abca1P41233 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Abca1P41233 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC11.76□□□□□ -0.53
Abca1P41233 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Abca1P41233 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC11.76□□□□□ -0.53
Abca1P41233 AA619741-201ENSMUST00000195095 646 ntBASIC11.76□□□□□ -0.53
Abca1P41233 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Abca1P41233 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Abca1P41233 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Abca1P41233 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Abca1P41233 Gm9115-201ENSMUST00000120192 1348 ntBASIC11.76□□□□□ -0.53
Abca1P41233 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Abca1P41233 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Abca1P41233 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC11.76□□□□□ -0.53
Abca1P41233 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Abca1P41233 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Abca1P41233 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Abca1P41233 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Abca1P41233 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Abca1P41233 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Abca1P41233 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Abca1P41233 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Abca1P41233 Gm11425-201ENSMUST00000119608 498 ntBASIC11.76□□□□□ -0.53
Abca1P41233 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Abca1P41233 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC11.76□□□□□ -0.53
Abca1P41233 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Abca1P41233 Mir6392-201ENSMUST00000184924 108 ntBASIC11.76□□□□□ -0.53
Abca1P41233 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Abca1P41233 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Abca1P41233 Gm9396-201ENSMUST00000076703 567 ntBASIC11.76□□□□□ -0.53
Abca1P41233 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Abca1P41233 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Abca1P41233 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Abca1P41233 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Abca1P41233 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC11.76□□□□□ -0.53
Abca1P41233 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Abca1P41233 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Abca1P41233 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Abca1P41233 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Abca1P41233 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Abca1P41233 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Abca1P41233 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Abca1P41233 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Abca1P41233 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC11.75□□□□□ -0.53
Abca1P41233 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms