Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HmgclP38060 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
HmgclP38060 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HmgclP38060 Gm5867-201ENSMUST00000063197 592 ntBASIC13.94□□□□□ -0.18
HmgclP38060 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
HmgclP38060 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
HmgclP38060 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HmgclP38060 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HmgclP38060 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HmgclP38060 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
HmgclP38060 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HmgclP38060 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
HmgclP38060 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
HmgclP38060 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HmgclP38060 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HmgclP38060 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HmgclP38060 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.93□□□□□ -0.18
HmgclP38060 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HmgclP38060 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HmgclP38060 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HmgclP38060 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HmgclP38060 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HmgclP38060 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HmgclP38060 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HmgclP38060 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HmgclP38060 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HmgclP38060 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HmgclP38060 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.93□□□□□ -0.18
HmgclP38060 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
HmgclP38060 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HmgclP38060 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.93□□□□□ -0.18
HmgclP38060 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HmgclP38060 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HmgclP38060 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
HmgclP38060 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HmgclP38060 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HmgclP38060 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HmgclP38060 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HmgclP38060 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
HmgclP38060 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HmgclP38060 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
HmgclP38060 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HmgclP38060 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HmgclP38060 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HmgclP38060 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HmgclP38060 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HmgclP38060 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
HmgclP38060 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
HmgclP38060 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HmgclP38060 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HmgclP38060 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
HmgclP38060 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
HmgclP38060 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HmgclP38060 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HmgclP38060 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
HmgclP38060 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HmgclP38060 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HmgclP38060 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
HmgclP38060 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.92□□□□□ -0.18
HmgclP38060 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HmgclP38060 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HmgclP38060 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HmgclP38060 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HmgclP38060 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.92□□□□□ -0.18
HmgclP38060 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HmgclP38060 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HmgclP38060 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
HmgclP38060 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HmgclP38060 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.92□□□□□ -0.18
HmgclP38060 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.92□□□□□ -0.18
HmgclP38060 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HmgclP38060 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HmgclP38060 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HmgclP38060 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HmgclP38060 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HmgclP38060 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.92□□□□□ -0.18
HmgclP38060 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HmgclP38060 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HmgclP38060 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HmgclP38060 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
HmgclP38060 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HmgclP38060 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HmgclP38060 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
HmgclP38060 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HmgclP38060 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.91□□□□□ -0.18
HmgclP38060 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.91□□□□□ -0.18
HmgclP38060 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
HmgclP38060 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HmgclP38060 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HmgclP38060 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HmgclP38060 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HmgclP38060 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HmgclP38060 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.91□□□□□ -0.18
HmgclP38060 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.91□□□□□ -0.18
HmgclP38060 Gm18027-201ENSMUST00000218947 619 ntBASIC13.91□□□□□ -0.18
HmgclP38060 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HmgclP38060 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.91□□□□□ -0.18
HmgclP38060 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HmgclP38060 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HmgclP38060 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 161.1 ms