Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nedd8P29595 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nedd8P29595 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nedd8P29595 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.05□□□□□ -0.32
Nedd8P29595 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Nedd8P29595 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nedd8P29595 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nedd8P29595 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nedd8P29595 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nedd8P29595 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nedd8P29595 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nedd8P29595 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nedd8P29595 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nedd8P29595 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nedd8P29595 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nedd8P29595 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nedd8P29595 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Nedd8P29595 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nedd8P29595 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nedd8P29595 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nedd8P29595 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nedd8P29595 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nedd8P29595 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nedd8P29595 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.04□□□□□ -0.32
Nedd8P29595 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.04□□□□□ -0.32
Nedd8P29595 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nedd8P29595 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC13.04□□□□□ -0.32
Nedd8P29595 Gm9013-201ENSMUST00000132939 882 ntBASIC13.04□□□□□ -0.32
Nedd8P29595 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC13.04□□□□□ -0.32
Nedd8P29595 Mir3081-201ENSMUST00000175305 84 ntBASIC13.04□□□□□ -0.32
Nedd8P29595 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Nedd8P29595 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC13.04□□□□□ -0.32
Nedd8P29595 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Nedd8P29595 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC13.04□□□□□ -0.32
Nedd8P29595 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.04□□□□□ -0.32
Nedd8P29595 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nedd8P29595 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Nedd8P29595 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.04□□□□□ -0.32
Nedd8P29595 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nedd8P29595 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Nedd8P29595 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.04□□□□□ -0.32
Nedd8P29595 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nedd8P29595 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nedd8P29595 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.04□□□□□ -0.32
Nedd8P29595 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nedd8P29595 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nedd8P29595 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nedd8P29595 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nedd8P29595 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nedd8P29595 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nedd8P29595 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nedd8P29595 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nedd8P29595 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nedd8P29595 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nedd8P29595 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Nedd8P29595 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Nedd8P29595 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nedd8P29595 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nedd8P29595 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nedd8P29595 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nedd8P29595 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Nedd8P29595 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nedd8P29595 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nedd8P29595 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nedd8P29595 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nedd8P29595 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.03□□□□□ -0.32
Nedd8P29595 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nedd8P29595 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nedd8P29595 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Nedd8P29595 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC13.03□□□□□ -0.32
Nedd8P29595 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC13.03□□□□□ -0.32
Nedd8P29595 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Nedd8P29595 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Nedd8P29595 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nedd8P29595 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Nedd8P29595 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC13.03□□□□□ -0.32
Nedd8P29595 Gm45328-201ENSMUST00000210942 917 ntBASIC13.03□□□□□ -0.32
Nedd8P29595 Gm8655-201ENSMUST00000221159 852 ntBASIC13.03□□□□□ -0.32
Nedd8P29595 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nedd8P29595 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nedd8P29595 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nedd8P29595 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nedd8P29595 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nedd8P29595 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.03□□□□□ -0.32
Nedd8P29595 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Nedd8P29595 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nedd8P29595 Gm5837-201ENSMUST00000191844 1369 ntBASIC13.03□□□□□ -0.32
Nedd8P29595 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nedd8P29595 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nedd8P29595 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nedd8P29595 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.03□□□□□ -0.32
Nedd8P29595 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nedd8P29595 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nedd8P29595 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nedd8P29595 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.03□□□□□ -0.32
Nedd8P29595 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nedd8P29595 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nedd8P29595 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.03□□□□□ -0.32
Nedd8P29595 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nedd8P29595 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms