Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Tnfrsf9P20334 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf9P20334 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
Tnfrsf9P20334 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf9P20334 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf9P20334 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf9P20334 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf9P20334 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf9P20334 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC11.64□□□□□ -0.55
Tnfrsf9P20334 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC11.64□□□□□ -0.55
Tnfrsf9P20334 Gm15483-201ENSMUST00000120338 456 ntBASIC11.64□□□□□ -0.55
Tnfrsf9P20334 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC11.64□□□□□ -0.55
Tnfrsf9P20334 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC11.64□□□□□ -0.55
Tnfrsf9P20334 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf9P20334 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Tnfrsf9P20334 Gm43433-201ENSMUST00000196573 481 ntBASIC11.64□□□□□ -0.55
Tnfrsf9P20334 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC11.64□□□□□ -0.55
Tnfrsf9P20334 AC125350.2-201ENSMUST00000224737 727 ntBASIC11.64□□□□□ -0.55
Tnfrsf9P20334 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf9P20334 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC11.64□□□□□ -0.55
Tnfrsf9P20334 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf9P20334 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf9P20334 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf9P20334 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf9P20334 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC11.64□□□□□ -0.55
Tnfrsf9P20334 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf9P20334 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC11.64□□□□□ -0.55
Tnfrsf9P20334 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf9P20334 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf9P20334 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf9P20334 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf9P20334 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf9P20334 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf9P20334 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfrsf9P20334 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfrsf9P20334 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfrsf9P20334 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfrsf9P20334 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfrsf9P20334 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfrsf9P20334 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Tnfrsf9P20334 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfrsf9P20334 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfrsf9P20334 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfrsf9P20334 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfrsf9P20334 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfrsf9P20334 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfrsf9P20334 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC11.63□□□□□ -0.55
Tnfrsf9P20334 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Tnfrsf9P20334 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC11.63□□□□□ -0.55
Tnfrsf9P20334 Gm14719-201ENSMUST00000121891 340 ntBASIC11.63□□□□□ -0.55
Tnfrsf9P20334 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfrsf9P20334 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Tnfrsf9P20334 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC11.63□□□□□ -0.55
Tnfrsf9P20334 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfrsf9P20334 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC11.63□□□□□ -0.55
Tnfrsf9P20334 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC11.63□□□□□ -0.55
Tnfrsf9P20334 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC11.63□□□□□ -0.55
Tnfrsf9P20334 Gm9063-201ENSMUST00000223299 582 ntBASIC11.63□□□□□ -0.55
Tnfrsf9P20334 AC132260.2-201ENSMUST00000224482 344 ntBASIC11.63□□□□□ -0.55
Tnfrsf9P20334 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfrsf9P20334 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC11.63□□□□□ -0.55
Tnfrsf9P20334 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC11.63□□□□□ -0.55
Tnfrsf9P20334 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfrsf9P20334 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfrsf9P20334 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfrsf9P20334 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfrsf9P20334 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfrsf9P20334 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfrsf9P20334 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfrsf9P20334 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC11.63□□□□□ -0.55
Tnfrsf9P20334 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfrsf9P20334 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfrsf9P20334 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfrsf9P20334 AC174678.1-201ENSMUST00000228007 2749 ntBASIC11.63□□□□□ -0.55
Tnfrsf9P20334 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfrsf9P20334 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf9P20334 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC11.62□□□□□ -0.55
Tnfrsf9P20334 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf9P20334 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf9P20334 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
Tnfrsf9P20334 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf9P20334 Syt7-204ENSMUST00000223586 1344 ntBASIC11.62□□□□□ -0.55
Tnfrsf9P20334 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf9P20334 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC11.62□□□□□ -0.55
Tnfrsf9P20334 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf9P20334 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Tnfrsf9P20334 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf9P20334 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf9P20334 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf9P20334 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf9P20334 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf9P20334 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Tnfrsf9P20334 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Tnfrsf9P20334 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Tnfrsf9P20334 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC11.62□□□□□ -0.55
Tnfrsf9P20334 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Tnfrsf9P20334 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf9P20334 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Tnfrsf9P20334 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tnfrsf9P20334 Gm13015-201ENSMUST00000118674 204 ntBASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms