Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VimP20152 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.35□□□□□ -0.11
VimP20152 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
VimP20152 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
VimP20152 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VimP20152 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
VimP20152 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VimP20152 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VimP20152 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VimP20152 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.35□□□□□ -0.11
VimP20152 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VimP20152 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
VimP20152 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
VimP20152 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VimP20152 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VimP20152 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
VimP20152 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VimP20152 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.34□□□□□ -0.11
VimP20152 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VimP20152 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VimP20152 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
VimP20152 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
VimP20152 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.34□□□□□ -0.11
VimP20152 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VimP20152 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
VimP20152 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
VimP20152 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
VimP20152 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
VimP20152 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.34□□□□□ -0.11
VimP20152 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VimP20152 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VimP20152 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
VimP20152 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VimP20152 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VimP20152 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VimP20152 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.34□□□□□ -0.11
VimP20152 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VimP20152 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
VimP20152 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
VimP20152 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VimP20152 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
VimP20152 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VimP20152 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VimP20152 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VimP20152 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
VimP20152 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
VimP20152 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VimP20152 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VimP20152 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
VimP20152 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VimP20152 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VimP20152 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
VimP20152 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
VimP20152 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
VimP20152 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.11
VimP20152 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
VimP20152 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
VimP20152 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
VimP20152 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
VimP20152 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
VimP20152 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
VimP20152 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.33□□□□□ -0.11
VimP20152 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.33□□□□□ -0.12
VimP20152 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
VimP20152 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
VimP20152 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
VimP20152 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VimP20152 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
VimP20152 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
VimP20152 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VimP20152 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
VimP20152 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
VimP20152 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
VimP20152 Gm8097-201ENSMUST00000117903 829 ntBASIC14.33□□□□□ -0.12
VimP20152 Gm13464-201ENSMUST00000119418 935 ntBASIC14.33□□□□□ -0.12
VimP20152 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
VimP20152 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.33□□□□□ -0.12
VimP20152 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
VimP20152 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
VimP20152 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VimP20152 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VimP20152 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VimP20152 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VimP20152 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
VimP20152 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VimP20152 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
VimP20152 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VimP20152 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
VimP20152 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
VimP20152 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
VimP20152 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VimP20152 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VimP20152 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VimP20152 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VimP20152 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
VimP20152 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.32□□□□□ -0.12
VimP20152 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
VimP20152 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VimP20152 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VimP20152 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms