Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
P20040 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
P20040 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
P20040 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
P20040 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
P20040 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
P20040 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
P20040 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
P20040 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
P20040 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
P20040 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
P20040 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
P20040 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
P20040 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
P20040 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.57□□□□□ -0.4
P20040 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.57□□□□□ -0.4
P20040 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12.57□□□□□ -0.4
P20040 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
P20040 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
P20040 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
P20040 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.57□□□□□ -0.4
P20040 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
P20040 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
P20040 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
P20040 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
P20040 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC12.57□□□□□ -0.4
P20040 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC12.57□□□□□ -0.4
P20040 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.57□□□□□ -0.4
P20040 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
P20040 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.57□□□□□ -0.4
P20040 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC12.57□□□□□ -0.4
P20040 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
P20040 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
P20040 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.57□□□□□ -0.4
P20040 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
P20040 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.57□□□□□ -0.4
P20040 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
P20040 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
P20040 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
P20040 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
P20040 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.57□□□□□ -0.4
P20040 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
P20040 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
P20040 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
P20040 Gm14451-201ENSMUST00000121581 1542 ntBASIC12.57□□□□□ -0.4
P20040 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P20040 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
P20040 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
P20040 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.56□□□□□ -0.4
P20040 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
P20040 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P20040 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
P20040 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P20040 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
P20040 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
P20040 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
P20040 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
P20040 AC131743.5-201ENSMUST00000220775 1618 ntBASIC12.56□□□□□ -0.4
P20040 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
P20040 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.56□□□□□ -0.4
P20040 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
P20040 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
P20040 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
P20040 Gm12017-201ENSMUST00000122453 1003 ntBASIC12.56□□□□□ -0.4
P20040 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
P20040 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
P20040 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.56□□□□□ -0.4
P20040 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
P20040 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
P20040 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
P20040 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P20040 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P20040 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P20040 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
P20040 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P20040 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
P20040 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P20040 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.56□□□□□ -0.4
P20040 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P20040 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
P20040 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P20040 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
P20040 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.56□□□□□ -0.4
P20040 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
P20040 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P20040 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
P20040 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
P20040 Gm13332-201ENSMUST00000120451 1398 ntBASIC12.56□□□□□ -0.4
P20040 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P20040 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
P20040 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
P20040 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
P20040 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P20040 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
P20040 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P20040 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
P20040 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P20040 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.55□□□□□ -0.4
P20040 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P20040 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms