Protein–RNA interactions for Protein: P15975

Usp53, Inactive ubiquitin carboxyl-terminal hydrolase 53, mousemouse

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp53P15975 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC16.33■□□□□ 0.2
Usp53P15975 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Usp53P15975 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Usp53P15975 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp53P15975 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Usp53P15975 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Usp53P15975 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp53P15975 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp53P15975 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp53P15975 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC16.32■□□□□ 0.2
Usp53P15975 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp53P15975 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp53P15975 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
Usp53P15975 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Usp53P15975 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp53P15975 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC16.32■□□□□ 0.2
Usp53P15975 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC16.32■□□□□ 0.2
Usp53P15975 Gm12134-201ENSMUST00000122109 520 ntBASIC16.32■□□□□ 0.2
Usp53P15975 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Usp53P15975 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Usp53P15975 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Usp53P15975 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp53P15975 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Usp53P15975 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC16.32■□□□□ 0.2
Usp53P15975 Gm5745-201ENSMUST00000183748 313 ntBASIC16.32■□□□□ 0.2
Usp53P15975 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC16.32■□□□□ 0.2
Usp53P15975 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp53P15975 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Usp53P15975 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp53P15975 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Usp53P15975 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp53P15975 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp53P15975 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp53P15975 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Usp53P15975 Gm9347-201ENSMUST00000211473 1607 ntBASIC16.31■□□□□ 0.2
Usp53P15975 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC16.31■□□□□ 0.2
Usp53P15975 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp53P15975 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC16.31■□□□□ 0.2
Usp53P15975 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp53P15975 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC16.31■□□□□ 0.2
Usp53P15975 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC16.31■□□□□ 0.2
Usp53P15975 AC139580.1-202ENSMUST00000223574 928 ntBASIC16.31■□□□□ 0.2
Usp53P15975 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp53P15975 Nupl1-207ENSMUST00000225311 2475 ntBASIC16.31■□□□□ 0.2
Usp53P15975 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp53P15975 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp53P15975 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp53P15975 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
Usp53P15975 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp53P15975 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp53P15975 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC16.31■□□□□ 0.2
Usp53P15975 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp53P15975 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Usp53P15975 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp53P15975 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp53P15975 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC16.3■□□□□ 0.2
Usp53P15975 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp53P15975 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Usp53P15975 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Usp53P15975 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp53P15975 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp53P15975 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp53P15975 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp53P15975 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Usp53P15975 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Usp53P15975 Gm6912-201ENSMUST00000117218 544 ntBASIC16.3■□□□□ 0.2
Usp53P15975 Gm23984-201ENSMUST00000157139 203 ntBASIC16.3■□□□□ 0.2
Usp53P15975 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC16.3■□□□□ 0.2
Usp53P15975 AC140375.2-201ENSMUST00000225283 584 ntBASIC16.3■□□□□ 0.2
Usp53P15975 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp53P15975 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp53P15975 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Usp53P15975 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Usp53P15975 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp53P15975 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp53P15975 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp53P15975 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp53P15975 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp53P15975 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Usp53P15975 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp53P15975 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp53P15975 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Usp53P15975 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Usp53P15975 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp53P15975 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Usp53P15975 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp53P15975 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
Usp53P15975 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Usp53P15975 Gm38102-201ENSMUST00000192791 1935 ntBASIC16.29■□□□□ 0.2
Usp53P15975 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Usp53P15975 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp53P15975 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Usp53P15975 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp53P15975 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC16.29■□□□□ 0.2
Usp53P15975 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC16.29■□□□□ 0.2
Usp53P15975 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC16.29■□□□□ 0.2
Usp53P15975 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp53P15975 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp53P15975 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp53P15975 Gm6180-201ENSMUST00000065243 498 ntBASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms