Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Msx1P13297 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Msx1P13297 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Msx1P13297 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Msx1P13297 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.45□□□□□ -0.26
Msx1P13297 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Msx1P13297 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Msx1P13297 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.45□□□□□ -0.26
Msx1P13297 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Msx1P13297 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Msx1P13297 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Msx1P13297 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Msx1P13297 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Msx1P13297 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Msx1P13297 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Msx1P13297 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Msx1P13297 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.44□□□□□ -0.26
Msx1P13297 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.44□□□□□ -0.26
Msx1P13297 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Msx1P13297 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Msx1P13297 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Msx1P13297 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Msx1P13297 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Msx1P13297 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Msx1P13297 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Msx1P13297 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Msx1P13297 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Msx1P13297 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Msx1P13297 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Msx1P13297 Gm5566-201ENSMUST00000116118 459 ntBASIC13.44□□□□□ -0.26
Msx1P13297 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.44□□□□□ -0.26
Msx1P13297 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Msx1P13297 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
Msx1P13297 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC13.44□□□□□ -0.26
Msx1P13297 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC13.44□□□□□ -0.26
Msx1P13297 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Msx1P13297 CT010431.1-201ENSMUST00000221249 1080 ntBASIC13.44□□□□□ -0.26
Msx1P13297 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.44□□□□□ -0.26
Msx1P13297 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Msx1P13297 Gm6180-201ENSMUST00000065243 498 ntBASIC13.44□□□□□ -0.26
Msx1P13297 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Msx1P13297 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Msx1P13297 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.44□□□□□ -0.26
Msx1P13297 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Msx1P13297 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Msx1P13297 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Msx1P13297 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.44□□□□□ -0.26
Msx1P13297 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Msx1P13297 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Msx1P13297 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Msx1P13297 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Msx1P13297 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Msx1P13297 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Msx1P13297 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Msx1P13297 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Msx1P13297 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Msx1P13297 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Msx1P13297 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Msx1P13297 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Msx1P13297 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Msx1P13297 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.43□□□□□ -0.26
Msx1P13297 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Msx1P13297 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.43□□□□□ -0.26
Msx1P13297 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.43□□□□□ -0.26
Msx1P13297 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.43□□□□□ -0.26
Msx1P13297 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Msx1P13297 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Msx1P13297 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Msx1P13297 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.43□□□□□ -0.26
Msx1P13297 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.43□□□□□ -0.26
Msx1P13297 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC13.43□□□□□ -0.26
Msx1P13297 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.43□□□□□ -0.26
Msx1P13297 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Msx1P13297 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Msx1P13297 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Msx1P13297 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Msx1P13297 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.43□□□□□ -0.26
Msx1P13297 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Msx1P13297 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Msx1P13297 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Msx1P13297 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Msx1P13297 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.43□□□□□ -0.26
Msx1P13297 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Msx1P13297 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Msx1P13297 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Msx1P13297 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Msx1P13297 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Msx1P13297 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.42□□□□□ -0.26
Msx1P13297 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Msx1P13297 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Msx1P13297 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Msx1P13297 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Msx1P13297 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Msx1P13297 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Msx1P13297 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.42□□□□□ -0.26
Msx1P13297 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Msx1P13297 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Msx1P13297 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Msx1P13297 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Msx1P13297 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms