Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PdgfrbP05622 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
PdgfrbP05622 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PdgfrbP05622 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PdgfrbP05622 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
PdgfrbP05622 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
PdgfrbP05622 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.3□□□□□ -0.12
PdgfrbP05622 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
PdgfrbP05622 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
PdgfrbP05622 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PdgfrbP05622 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PdgfrbP05622 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
PdgfrbP05622 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PdgfrbP05622 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PdgfrbP05622 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
PdgfrbP05622 Gm25948-201ENSMUST00000175334 112 ntBASIC14.3□□□□□ -0.12
PdgfrbP05622 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.3□□□□□ -0.12
PdgfrbP05622 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.3□□□□□ -0.12
PdgfrbP05622 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PdgfrbP05622 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
PdgfrbP05622 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
PdgfrbP05622 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PdgfrbP05622 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PdgfrbP05622 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.3□□□□□ -0.12
PdgfrbP05622 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PdgfrbP05622 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
PdgfrbP05622 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PdgfrbP05622 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PdgfrbP05622 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PdgfrbP05622 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PdgfrbP05622 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PdgfrbP05622 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PdgfrbP05622 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
PdgfrbP05622 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PdgfrbP05622 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PdgfrbP05622 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PdgfrbP05622 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PdgfrbP05622 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
PdgfrbP05622 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PdgfrbP05622 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
PdgfrbP05622 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
PdgfrbP05622 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.29□□□□□ -0.12
PdgfrbP05622 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PdgfrbP05622 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
PdgfrbP05622 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PdgfrbP05622 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PdgfrbP05622 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.29□□□□□ -0.12
PdgfrbP05622 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.29□□□□□ -0.12
PdgfrbP05622 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PdgfrbP05622 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.29□□□□□ -0.12
PdgfrbP05622 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.29□□□□□ -0.12
PdgfrbP05622 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
PdgfrbP05622 Mir125a-201ENSMUST00000083545 68 ntBASIC14.29□□□□□ -0.12
PdgfrbP05622 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PdgfrbP05622 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
PdgfrbP05622 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
PdgfrbP05622 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PdgfrbP05622 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
PdgfrbP05622 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PdgfrbP05622 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
PdgfrbP05622 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PdgfrbP05622 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.29□□□□□ -0.12
PdgfrbP05622 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PdgfrbP05622 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.29□□□□□ -0.12
PdgfrbP05622 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PdgfrbP05622 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PdgfrbP05622 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.29□□□□□ -0.12
PdgfrbP05622 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PdgfrbP05622 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PdgfrbP05622 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PdgfrbP05622 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PdgfrbP05622 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
PdgfrbP05622 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PdgfrbP05622 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PdgfrbP05622 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PdgfrbP05622 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
PdgfrbP05622 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PdgfrbP05622 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
PdgfrbP05622 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PdgfrbP05622 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PdgfrbP05622 Gm8410-201ENSMUST00000117225 605 ntBASIC14.28□□□□□ -0.12
PdgfrbP05622 Gm15957-201ENSMUST00000118893 974 ntBASIC14.28□□□□□ -0.12
PdgfrbP05622 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.28□□□□□ -0.12
PdgfrbP05622 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.28□□□□□ -0.12
PdgfrbP05622 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.28□□□□□ -0.12
PdgfrbP05622 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
PdgfrbP05622 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
PdgfrbP05622 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PdgfrbP05622 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PdgfrbP05622 AA619741-201ENSMUST00000195095 646 ntBASIC14.28□□□□□ -0.12
PdgfrbP05622 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
PdgfrbP05622 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PdgfrbP05622 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
PdgfrbP05622 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PdgfrbP05622 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
PdgfrbP05622 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.28□□□□□ -0.12
PdgfrbP05622 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.28□□□□□ -0.12
PdgfrbP05622 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PdgfrbP05622 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.28□□□□□ -0.12
PdgfrbP05622 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms