Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CcnkO88874 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CcnkO88874 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CcnkO88874 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CcnkO88874 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CcnkO88874 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CcnkO88874 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CcnkO88874 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CcnkO88874 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12.62□□□□□ -0.39
CcnkO88874 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
CcnkO88874 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CcnkO88874 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CcnkO88874 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CcnkO88874 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CcnkO88874 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CcnkO88874 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
CcnkO88874 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CcnkO88874 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CcnkO88874 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CcnkO88874 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CcnkO88874 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
CcnkO88874 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.61□□□□□ -0.39
CcnkO88874 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CcnkO88874 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.61□□□□□ -0.39
CcnkO88874 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CcnkO88874 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
CcnkO88874 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.61□□□□□ -0.39
CcnkO88874 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CcnkO88874 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CcnkO88874 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
CcnkO88874 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CcnkO88874 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
CcnkO88874 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
CcnkO88874 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC12.61□□□□□ -0.39
CcnkO88874 Gm2272-201ENSMUST00000194903 582 ntBASIC12.61□□□□□ -0.39
CcnkO88874 AC138767.1-201ENSMUST00000222661 415 ntBASIC12.61□□□□□ -0.39
CcnkO88874 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CcnkO88874 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CcnkO88874 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
CcnkO88874 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
CcnkO88874 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CcnkO88874 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.61□□□□□ -0.39
CcnkO88874 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.61□□□□□ -0.39
CcnkO88874 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CcnkO88874 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CcnkO88874 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CcnkO88874 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.61□□□□□ -0.39
CcnkO88874 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.61□□□□□ -0.39
CcnkO88874 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.61□□□□□ -0.39
CcnkO88874 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CcnkO88874 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CcnkO88874 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CcnkO88874 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CcnkO88874 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CcnkO88874 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CcnkO88874 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CcnkO88874 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CcnkO88874 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CcnkO88874 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CcnkO88874 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CcnkO88874 Ssr1-204ENSMUST00000225319 1610 ntBASIC12.6□□□□□ -0.39
CcnkO88874 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
CcnkO88874 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC12.6□□□□□ -0.39
CcnkO88874 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CcnkO88874 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CcnkO88874 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CcnkO88874 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CcnkO88874 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC12.6□□□□□ -0.39
CcnkO88874 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CcnkO88874 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CcnkO88874 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC12.6□□□□□ -0.39
CcnkO88874 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC12.6□□□□□ -0.39
CcnkO88874 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
CcnkO88874 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC12.6□□□□□ -0.39
CcnkO88874 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CcnkO88874 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CcnkO88874 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CcnkO88874 AC025913.2-201ENSMUST00000220136 1766 ntBASIC12.6□□□□□ -0.39
CcnkO88874 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CcnkO88874 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CcnkO88874 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CcnkO88874 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CcnkO88874 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CcnkO88874 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CcnkO88874 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CcnkO88874 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CcnkO88874 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CcnkO88874 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CcnkO88874 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CcnkO88874 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CcnkO88874 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CcnkO88874 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CcnkO88874 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CcnkO88874 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
CcnkO88874 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC12.59□□□□□ -0.39
CcnkO88874 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CcnkO88874 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CcnkO88874 Gm37935-201ENSMUST00000192012 982 ntBASIC12.59□□□□□ -0.39
CcnkO88874 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC12.59□□□□□ -0.39
CcnkO88874 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms