Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ClppO88696 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
ClppO88696 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
ClppO88696 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ClppO88696 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
ClppO88696 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ClppO88696 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ClppO88696 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ClppO88696 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ClppO88696 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
ClppO88696 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
ClppO88696 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
ClppO88696 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
ClppO88696 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ClppO88696 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ClppO88696 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ClppO88696 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ClppO88696 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ClppO88696 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ClppO88696 Gm15653-201ENSMUST00000119247 907 ntBASIC13.84□□□□□ -0.19
ClppO88696 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.84□□□□□ -0.19
ClppO88696 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ClppO88696 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
ClppO88696 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ClppO88696 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.84□□□□□ -0.19
ClppO88696 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ClppO88696 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ClppO88696 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ClppO88696 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ClppO88696 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ClppO88696 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ClppO88696 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
ClppO88696 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ClppO88696 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ClppO88696 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
ClppO88696 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ClppO88696 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ClppO88696 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ClppO88696 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ClppO88696 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
ClppO88696 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
ClppO88696 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
ClppO88696 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
ClppO88696 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ClppO88696 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ClppO88696 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ClppO88696 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
ClppO88696 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ClppO88696 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
ClppO88696 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
ClppO88696 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ClppO88696 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
ClppO88696 Gm8749-201ENSMUST00000117737 331 ntBASIC13.83□□□□□ -0.2
ClppO88696 Gm12151-201ENSMUST00000121374 290 ntBASIC13.83□□□□□ -0.2
ClppO88696 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.83□□□□□ -0.2
ClppO88696 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ClppO88696 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ClppO88696 Gm44344-201ENSMUST00000200287 129 ntBASIC13.83□□□□□ -0.2
ClppO88696 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ClppO88696 Gm9182-201ENSMUST00000217829 639 ntBASIC13.83□□□□□ -0.2
ClppO88696 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.83□□□□□ -0.2
ClppO88696 Gm9063-201ENSMUST00000223299 582 ntBASIC13.83□□□□□ -0.2
ClppO88696 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.83□□□□□ -0.2
ClppO88696 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.83□□□□□ -0.2
ClppO88696 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
ClppO88696 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ClppO88696 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ClppO88696 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ClppO88696 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.83□□□□□ -0.2
ClppO88696 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.83□□□□□ -0.2
ClppO88696 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ClppO88696 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.83□□□□□ -0.2
ClppO88696 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ClppO88696 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.83□□□□□ -0.2
ClppO88696 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
ClppO88696 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ClppO88696 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ClppO88696 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ClppO88696 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.82□□□□□ -0.2
ClppO88696 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
ClppO88696 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ClppO88696 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ClppO88696 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ClppO88696 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ClppO88696 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.82□□□□□ -0.2
ClppO88696 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
ClppO88696 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ClppO88696 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ClppO88696 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
ClppO88696 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
ClppO88696 Gm24543-201ENSMUST00000103867 82 ntBASIC13.82□□□□□ -0.2
ClppO88696 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
ClppO88696 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.82□□□□□ -0.2
ClppO88696 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.82□□□□□ -0.2
ClppO88696 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ClppO88696 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ClppO88696 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
ClppO88696 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ClppO88696 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
ClppO88696 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms