Protein–RNA interactions for Protein: O88508

Dnmt3a, DNA (cytosine-5)-methyltransferase 3A, mousemouse

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3aO88508 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Dnmt3aO88508 Mir6956-201ENSMUST00000183598 62 ntBASIC14.25□□□□□ -0.13
Dnmt3aO88508 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Dnmt3aO88508 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Dnmt3aO88508 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Dnmt3aO88508 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Dnmt3aO88508 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Dnmt3aO88508 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Dnmt3aO88508 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Dnmt3aO88508 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Dnmt3aO88508 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Dnmt3aO88508 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Dnmt3aO88508 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Dnmt3aO88508 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.25□□□□□ -0.13
Dnmt3aO88508 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Dnmt3aO88508 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Dnmt3aO88508 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Dnmt3aO88508 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Dnmt3aO88508 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Dnmt3aO88508 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Dnmt3aO88508 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Dnmt3aO88508 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Dnmt3aO88508 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Dnmt3aO88508 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.24□□□□□ -0.13
Dnmt3aO88508 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Dnmt3aO88508 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.24□□□□□ -0.13
Dnmt3aO88508 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Dnmt3aO88508 Gm5566-201ENSMUST00000116118 459 ntBASIC14.24□□□□□ -0.13
Dnmt3aO88508 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.24□□□□□ -0.13
Dnmt3aO88508 Gm23547-201ENSMUST00000158210 271 ntBASIC14.24□□□□□ -0.13
Dnmt3aO88508 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Dnmt3aO88508 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Dnmt3aO88508 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Dnmt3aO88508 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.24□□□□□ -0.13
Dnmt3aO88508 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Dnmt3aO88508 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Dnmt3aO88508 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Dnmt3aO88508 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Dnmt3aO88508 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Dnmt3aO88508 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Dnmt3aO88508 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Dnmt3aO88508 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Dnmt3aO88508 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.24□□□□□ -0.13
Dnmt3aO88508 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Dnmt3aO88508 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Dnmt3aO88508 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Dnmt3aO88508 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Dnmt3aO88508 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Dnmt3aO88508 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.23□□□□□ -0.13
Dnmt3aO88508 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Dnmt3aO88508 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Dnmt3aO88508 Acot6-202ENSMUST00000222921 3622 ntBASIC14.23□□□□□ -0.13
Dnmt3aO88508 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.23□□□□□ -0.13
Dnmt3aO88508 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.23□□□□□ -0.13
Dnmt3aO88508 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Dnmt3aO88508 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Dnmt3aO88508 Gm28630-201ENSMUST00000187806 498 ntBASIC14.23□□□□□ -0.13
Dnmt3aO88508 Gm44872-201ENSMUST00000207864 420 ntBASIC14.23□□□□□ -0.13
Dnmt3aO88508 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Dnmt3aO88508 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Dnmt3aO88508 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Dnmt3aO88508 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.23□□□□□ -0.13
Dnmt3aO88508 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Dnmt3aO88508 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.23□□□□□ -0.13
Dnmt3aO88508 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.23□□□□□ -0.13
Dnmt3aO88508 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Dnmt3aO88508 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.23□□□□□ -0.13
Dnmt3aO88508 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.22□□□□□ -0.13
Dnmt3aO88508 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Dnmt3aO88508 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Dnmt3aO88508 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Dnmt3aO88508 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Dnmt3aO88508 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Dnmt3aO88508 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Dnmt3aO88508 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Dnmt3aO88508 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Dnmt3aO88508 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Dnmt3aO88508 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.22□□□□□ -0.13
Dnmt3aO88508 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Dnmt3aO88508 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.22□□□□□ -0.13
Dnmt3aO88508 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Dnmt3aO88508 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Dnmt3aO88508 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Dnmt3aO88508 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Dnmt3aO88508 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Dnmt3aO88508 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Dnmt3aO88508 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Dnmt3aO88508 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.22□□□□□ -0.13
Dnmt3aO88508 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Dnmt3aO88508 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.22□□□□□ -0.13
Dnmt3aO88508 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.22□□□□□ -0.13
Dnmt3aO88508 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.22□□□□□ -0.13
Dnmt3aO88508 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Dnmt3aO88508 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Dnmt3aO88508 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Dnmt3aO88508 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Dnmt3aO88508 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Dnmt3aO88508 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Dnmt3aO88508 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Dnmt3aO88508 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms