Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Gm27430-201ENSMUST00000184585 107 ntBASIC14.06□□□□□ -0.16
Ldb2O55203 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.06□□□□□ -0.16
Ldb2O55203 Gm44333-201ENSMUST00000197168 107 ntBASIC14.06□□□□□ -0.16
Ldb2O55203 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Ldb2O55203 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.06□□□□□ -0.16
Ldb2O55203 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ldb2O55203 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ldb2O55203 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ldb2O55203 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ldb2O55203 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ldb2O55203 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Ldb2O55203 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ldb2O55203 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Ldb2O55203 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ldb2O55203 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ldb2O55203 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ldb2O55203 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ldb2O55203 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ldb2O55203 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.06□□□□□ -0.16
Ldb2O55203 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ldb2O55203 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ldb2O55203 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ldb2O55203 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ldb2O55203 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Ldb2O55203 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.05□□□□□ -0.16
Ldb2O55203 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ldb2O55203 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ldb2O55203 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Ldb2O55203 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.05□□□□□ -0.16
Ldb2O55203 Gm13616-201ENSMUST00000120600 222 ntBASIC14.05□□□□□ -0.16
Ldb2O55203 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ldb2O55203 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ldb2O55203 Gm25144-201ENSMUST00000179561 110 ntBASIC14.05□□□□□ -0.16
Ldb2O55203 Gm25352-201ENSMUST00000179815 110 ntBASIC14.05□□□□□ -0.16
Ldb2O55203 Gm27618-201ENSMUST00000183671 60 ntBASIC14.05□□□□□ -0.16
Ldb2O55203 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.05□□□□□ -0.16
Ldb2O55203 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.05□□□□□ -0.16
Ldb2O55203 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.05□□□□□ -0.16
Ldb2O55203 Gm38294-201ENSMUST00000192831 381 ntBASIC14.05□□□□□ -0.16
Ldb2O55203 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.05□□□□□ -0.16
Ldb2O55203 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.05□□□□□ -0.16
Ldb2O55203 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.05□□□□□ -0.16
Ldb2O55203 Gm6916-202ENSMUST00000205523 195 ntBASIC14.05□□□□□ -0.16
Ldb2O55203 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.05□□□□□ -0.16
Ldb2O55203 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ldb2O55203 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ldb2O55203 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.05□□□□□ -0.16
Ldb2O55203 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ldb2O55203 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ldb2O55203 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ldb2O55203 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ldb2O55203 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ldb2O55203 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ldb2O55203 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ldb2O55203 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.05□□□□□ -0.16
Ldb2O55203 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ldb2O55203 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ldb2O55203 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Ldb2O55203 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ldb2O55203 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Ldb2O55203 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.04□□□□□ -0.16
Ldb2O55203 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Ldb2O55203 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ldb2O55203 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Ldb2O55203 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ldb2O55203 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ldb2O55203 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.04□□□□□ -0.16
Ldb2O55203 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ldb2O55203 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ldb2O55203 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ldb2O55203 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ldb2O55203 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ldb2O55203 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ldb2O55203 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ldb2O55203 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.04□□□□□ -0.16
Ldb2O55203 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ldb2O55203 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ldb2O55203 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.04□□□□□ -0.16
Ldb2O55203 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.04□□□□□ -0.16
Ldb2O55203 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ldb2O55203 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ldb2O55203 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.04□□□□□ -0.16
Ldb2O55203 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ldb2O55203 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ldb2O55203 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Ldb2O55203 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ldb2O55203 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ldb2O55203 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Ldb2O55203 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Ldb2O55203 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.04□□□□□ -0.16
Ldb2O55203 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ldb2O55203 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ldb2O55203 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ldb2O55203 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ldb2O55203 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ldb2O55203 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.04□□□□□ -0.16
Ldb2O55203 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ldb2O55203 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ldb2O55203 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ldb2O55203 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms