Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl13O55038 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Cxcl13O55038 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC11.93□□□□□ -0.5
Cxcl13O55038 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Cxcl13O55038 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Cxcl13O55038 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl13O55038 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl13O55038 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl13O55038 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl13O55038 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl13O55038 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Cxcl13O55038 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl13O55038 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl13O55038 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC11.93□□□□□ -0.5
Cxcl13O55038 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC11.93□□□□□ -0.5
Cxcl13O55038 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl13O55038 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl13O55038 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Cxcl13O55038 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC11.93□□□□□ -0.5
Cxcl13O55038 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl13O55038 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl13O55038 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl13O55038 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl13O55038 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Cxcl13O55038 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Cxcl13O55038 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl13O55038 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC11.93□□□□□ -0.5
Cxcl13O55038 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl13O55038 Gm6159-201ENSMUST00000191249 1724 ntBASIC11.93□□□□□ -0.5
Cxcl13O55038 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC11.93□□□□□ -0.5
Cxcl13O55038 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC11.93□□□□□ -0.5
Cxcl13O55038 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl13O55038 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC11.93□□□□□ -0.5
Cxcl13O55038 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl13O55038 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Cxcl13O55038 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC11.93□□□□□ -0.5
Cxcl13O55038 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcl13O55038 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC11.92□□□□□ -0.5
Cxcl13O55038 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcl13O55038 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcl13O55038 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcl13O55038 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Cxcl13O55038 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcl13O55038 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcl13O55038 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcl13O55038 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcl13O55038 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcl13O55038 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcl13O55038 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcl13O55038 Gm6912-201ENSMUST00000117218 544 ntBASIC11.92□□□□□ -0.5
Cxcl13O55038 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcl13O55038 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC11.92□□□□□ -0.5
Cxcl13O55038 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC11.92□□□□□ -0.5
Cxcl13O55038 AC131690.1-201ENSMUST00000218406 374 ntBASIC11.92□□□□□ -0.5
Cxcl13O55038 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
Cxcl13O55038 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC11.92□□□□□ -0.5
Cxcl13O55038 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Cxcl13O55038 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcl13O55038 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcl13O55038 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC11.92□□□□□ -0.5
Cxcl13O55038 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Cxcl13O55038 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcl13O55038 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC11.92□□□□□ -0.5
Cxcl13O55038 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcl13O55038 AC162938.1-201ENSMUST00000213140 2323 ntBASIC11.92□□□□□ -0.5
Cxcl13O55038 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcl13O55038 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcl13O55038 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcl13O55038 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcl13O55038 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcl13O55038 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC11.91□□□□□ -0.5
Cxcl13O55038 AC121801.1-201ENSMUST00000225363 1899 ntBASIC11.91□□□□□ -0.5
Cxcl13O55038 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcl13O55038 Gm9856-201ENSMUST00000217077 2578 ntBASIC11.91□□□□□ -0.5
Cxcl13O55038 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcl13O55038 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcl13O55038 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcl13O55038 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcl13O55038 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcl13O55038 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcl13O55038 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcl13O55038 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcl13O55038 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcl13O55038 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC11.91□□□□□ -0.5
Cxcl13O55038 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Cxcl13O55038 Gm15240-201ENSMUST00000118156 720 ntBASIC11.91□□□□□ -0.5
Cxcl13O55038 Gm12138-201ENSMUST00000122180 951 ntBASIC11.91□□□□□ -0.5
Cxcl13O55038 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcl13O55038 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcl13O55038 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcl13O55038 Gm18905-201ENSMUST00000205454 928 ntBASIC11.91□□□□□ -0.5
Cxcl13O55038 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC11.91□□□□□ -0.5
Cxcl13O55038 Gm45384-201ENSMUST00000210451 277 ntBASIC11.91□□□□□ -0.5
Cxcl13O55038 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Cxcl13O55038 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcl13O55038 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcl13O55038 AC115735.4-201ENSMUST00000227460 1944 ntBASIC11.91□□□□□ -0.5
Cxcl13O55038 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcl13O55038 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Cxcl13O55038 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms